RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 ENO4A6NNW6 628 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 KDM4EB2RXH2 506 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-214ENST00000495485 WWP2O00308 870 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 CDK2AP1O14519 115 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 SLC22A1O15245 554 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 OR2T1O43869 369 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 PRKYO43930 277 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 PTP4A3O75365 173 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 KLF7O75840 302 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-214ENST00000495485 MT-ATP6P00846 226 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 STSP08842 583 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 HTR1AP08908 422 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 PEPDP12955 493 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 FUT1P19526 365 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 MAKP20794 623 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 FKBP2P26885 142 aaKnown RBP9.35□□□□□ -0.91
HDAC3-214ENST00000495485 CAPZA2P47755 286 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 MTNR1AP48039 350 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 NUDT6P53370 316 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 CDH11P55287 796 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 EFNB1P98172 346 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 ZNF117Q03924 483 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 ZNF91Q05481 1191 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 LGALS3BPQ08380 585 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 CDC20Q12834 499 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 POU4F2Q12837 409 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 SNTA1Q13424 505 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 MFSD13AQ14CX5 517 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 TGIF1Q15583 401 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 CD226Q15762 336 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 SYT14P1Q58G82 188 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 SLC30A6Q6NXT4 461 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 WDR88Q6ZMY6 472 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 DPY19L2P2Q6ZN68 376 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 CXXC5Q7LFL8 322 aaKnown RBP9.35□□□□□ -0.91
HDAC3-214ENST00000495485 ATG4DQ86TL0 474 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-214ENST00000495485 MARCH3Q86UD3 253 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 P2RY8Q86VZ1 359 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 IQCF1Q8N6M8 205 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 C10orf53Q8N6V4 93 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 PSD4Q8NDX1 1056 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 PROKR2Q8NFJ6 384 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 ELP5Q8TE02 316 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 LIPHQ8WWY8 451 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 ST8SIA1Q92185 356 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 SIGLEC11Q96RL6 698 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 LMF1Q96S06 567 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 SECISBP2Q96T21 854 aaKnown RBP9.35□□□□□ -0.91
HDAC3-214ENST00000495485 PLA2G12AQ9BZM1 189 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 ADAM19Q9H013 955 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 PRORYQ9H606 182 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 AMBNQ9NP70 447 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 MMP25Q9NPA2 562 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 ATP13A2Q9NQ11 1180 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 MEPEQ9NQ76 525 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-214ENST00000495485 NANSQ9NR45 359 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 CMC2Q9NRP2 79 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 TAS2R10Q9NYW0 307 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 DNAJC27Q9NZQ0 273 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 AASSQ9UDR5 926 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 TUBD1Q9UJT1 453 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 DIMT1Q9UNQ2 313 aaKnown RBP9.35□□□□□ -0.91
HDAC3-214ENST00000495485 YARS2Q9Y2Z4 477 aaKnown RBP9.35□□□□□ -0.91
HDAC3-214ENST00000495485 PCDHGB7Q9Y5F8 929 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 ANKUB1A6NFN9 424 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 SLC22A31A6NKX4 558 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 CDC42EP2O14613 210 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 IMPA2O14732 288 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 SCO2O43819 266 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 AHCYL1O43865 530 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 IGFBP1P08833 259 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-214ENST00000495485 FBXO45P0C2W1 286 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 TACR3P29371 465 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 HTR1FP30939 366 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 RPL4P36578 427 aaKnown RBP9.34□□□□□ -0.91
HDAC3-214ENST00000495485 APOBEC1P41238 236 aaKnown RBP9.34□□□□□ -0.91
HDAC3-214ENST00000495485 SERPINB10P48595 397 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 RNF144AP50876 292 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-214ENST00000495485 ZNF41P51814 821 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-214ENST00000495485 EFNA3P52797 238 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 PIGFQ07326 219 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 DYNC1I2Q13409 638 aaKnown RBP9.34□□□□□ -0.91
HDAC3-214ENST00000495485 PCOLCEQ15113 449 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 TIGD6Q17RP2 521 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 LCN1P1Q5VSP4 162 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 FAM69BQ5VUD6 431 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 FAM199XQ6PEV8 388 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-214ENST00000495485 GRINAQ7Z429 371 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 OR8D4Q8NGM9 314 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 OR6S1Q8NH40 331 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 OR51A7Q8NH64 312 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 STK35Q8TDR2 534 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 ADAMTS17Q8TE56 1095 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 SH3YL1Q96HL8 342 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-214ENST00000495485 COG8Q96MW5 612 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 WDR77Q9BQA1 342 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-214ENST00000495485 FUNDC2Q9BWH2 189 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 PTGES2Q9H7Z7 377 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 METTL7AQ9H8H3 244 aa9.34□□□□□ -0.91
HDAC3-214ENST00000495485 FKRPQ9H9S5 495 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms