RNA–Protein interactions for RNA: ENST00000485093.1

TM9SF3-205, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-205ENST00000485093 CHST10O43529 356 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 HCRTR1O43613 425 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 OR10H3O60404 316 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 TPST2O60704 377 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 SDC3O75056 442 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 RDH16O75452 317 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 ZBTB11O95625 1053 aaPredicted RBP3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 GPR75O95800 540 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 LGI1O95970 557 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 CSF2P04141 144 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 ALPPP05187 535 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 H1F0P07305 194 aaKnown RBP3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 DCNP07585 359 aaKnown RBP3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 FHP07954 510 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 IGFBP1P08833 259 aaPredicted RBP3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 HNRNPCL4P0DMR1 293 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 CPMP14384 443 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 FOSL2P15408 326 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 BCKDHBP21953 392 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 ALDH4A1P30038 563 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 GGT2P36268 569 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 TSFMP43897 325 aaKnown RBP3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 IDH2P48735 452 aaKnown RBP3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 CSNK1EP49674 416 aaKnown RBP3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 CRISP1P54107 249 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 CRISP3P54108 245 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 C21orf59P57076 290 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 RAB38P57729 211 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 SMIM11AP58511 58 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 STARD6P59095 220 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 KRTAP10-11P60412 298 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 KEAP1Q14145 624 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 ERV3-1Q14264 604 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 GNA13Q14344 377 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 MAD2L1BPQ15013 274 aaPredicted RBP3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 EXOSC7Q15024 291 aaKnown RBP3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 ELOCQ15369 112 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 PRICKLE4Q2TBC4 344 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 DEFB133Q30KQ1 61 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 GXYLT1Q4G148 440 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 TRMT12Q53H54 448 aaKnown RBP3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 ZNF311Q5JNZ3 666 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 MANEAQ5SRI9 462 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 ATAD3BQ5T9A4 648 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 NKAIN2Q5VXU1 208 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 TMEM236Q5W0B7 351 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 PODNL1Q6PEZ8 512 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 TMEM64Q6YI46 380 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 C16orf62Q7Z3J2 963 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 VRK2Q86Y07 508 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 CA13Q8N1Q1 262 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 LRRC25Q8N386 305 aaPredicted RBP3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 METTL27Q8N6F8 245 aaPredicted RBP3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 AQP11Q8NBQ7 271 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 ZNF540Q8NDQ6 660 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 OR7G2Q8NG99 324 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 OR4N2Q8NGD1 307 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 OR9A4Q8NGU2 314 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 ADAMTS16Q8TE57 1224 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 PHF10Q8WUB8 498 aaKnown RBP3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 RASSF5Q8WWW0 418 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 NCSTNQ92542 709 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 CDS1Q92903 461 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 C12orf43Q96C57 262 aaKnown RBP3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 TGM7Q96PF1 710 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 NODALQ96S42 347 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 MAP3K3Q99759 626 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 TREX2Q9BQ50 279 aaPredicted RBP3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 LRRC61Q9BV99 259 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 FNDC11Q9BVV2 318 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 PINK1Q9BXM7 581 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 DGCR6LQ9BY27 220 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 UCK2Q9BZX2 261 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 NAA50Q9GZZ1 169 aaKnown RBP3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 LHPPQ9H008 270 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 TBC1D17Q9HA65 648 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 NMNAT1Q9HAN9 279 aaPredicted RBP3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 ANKHQ9HCJ1 492 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 LYRM4Q9HD34 91 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 BCL2L10Q9HD36 194 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 ADAP2Q9NPF8 381 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 PNRC2Q9NPJ4 139 aaKnown RBP3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 DDX18Q9NVP1 670 aaKnown RBP3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 MS4A12Q9NXJ0 267 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 GIN1Q9NXP7 522 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 UPB1Q9UBR1 384 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 WNT16Q9UBV4 365 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 SLC13A4Q9UKG4 626 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 BLOC1S6Q9UL45 172 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 MKLN1Q9UL63 735 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 RNF6Q9Y252 685 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 POFUT2Q9Y2G5 429 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 SLC22A7Q9Y694 548 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 HSPE1-MOB4S4R3N1 261 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 SPACA6W5XKT8 324 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 BPTFQ12830 3046 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 HEATR5BQ9P2D3 2071 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 COL4A2P08572 1712 aa3.9□□□□□ -1.79
TM9SF3-205ENST00000485093 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms