RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 NRG3P56975 720 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 TUSC1Q2TAM9 212 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 SLC36A2Q495M3 483 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 GPR139Q6DWJ6 353 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 JAZF1Q86VZ6 243 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 TPRA1Q86W33 373 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 IL17RCQ8NAC3 791 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 OR6N2Q8NGY6 317 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 ASB12Q8WXK4 309 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 VOPP1Q96AW1 172 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 OR1F2PQ96R84 312 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 C1QTNF7Q9BXJ2 289 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 ERVMER34-1Q9H9K5 563 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 PRDM7Q9NQW5 492 aa11.74□□□□□ -0.53
VPS52-218ENST00000482399 ING1Q9UK53 422 aaPredicted RBP11.74□□□□□ -0.53
VPS52-218ENST00000482399 IGKV1-8A0A0C4DH67 115 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 TMEM72A0PK05 275 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 ATP1B1P05026 303 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 FAM157BP0CG42 384 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 PRKAR1BP31321 381 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 TAF13Q15543 124 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 RPE65Q16518 533 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 ZNF542PQ5EBM4 170 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 ASPGQ86U10 573 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 DUSP19Q8WTR2 217 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 TSACCQ96A04 125 aaPredicted RBP11.73□□□□□ -0.53
VPS52-218ENST00000482399 GPR137Q96N19 417 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 LRRC3BQ96PB8 259 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 IGFLR1Q9H665 355 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 EPHX3Q9H6B9 360 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 PLEKHA6Q9Y2H5 1048 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 SLC27A6Q9Y2P4 619 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 hCG_1807616A0A1W2PRN6 198 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 ITGA10O75578 1167 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 SRMP19623 302 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 ITPKBP27987 946 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 BTCP35070 178 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 ARHGAP19Q14CB8 494 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 MLF2Q15773 248 aaPredicted RBP11.73□□□□□ -0.53
VPS52-218ENST00000482399 TMEM255AQ5JRV8 349 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 RNLSQ5VYX0 342 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 LIN54Q6MZP7 749 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 LEG1Q6P5S2 330 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 ZNF454Q8N9F8 522 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 BRIX1Q8TDN6 353 aaKnown RBP11.73□□□□□ -0.53
VPS52-218ENST00000482399 PELI1Q96FA3 418 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 SEC22AQ96IW7 307 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 SLC6A20Q9NP91 592 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 CMC2Q9NRP2 79 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 CREBZFQ9NS37 354 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 MED17Q9NVC6 651 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 ACSL5Q9ULC5 683 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 A0A1B0GWA3 101 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 A0A1W2PPV9 198 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 ZIC2O95409 532 aaPredicted RBP11.73□□□□□ -0.53
VPS52-218ENST00000482399 IGHA1P01876 353 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 HLA-DQB1P01920 261 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 F13BP05160 661 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 TYRP1P17643 537 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 HTR2AP28223 471 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 ERV3-1Q14264 604 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 ZNHIT3Q15649 155 aaPredicted RBP11.73□□□□□ -0.53
VPS52-218ENST00000482399 NKPD1Q17RQ9 610 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 TRILQ7L0X0 811 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 PRSS42Q7Z5A4 293 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 LIX1LQ8IVB5 337 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 CASTOR1Q8WTX7 329 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 SORCS2Q96PQ0 1159 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 ZNF471Q9BX82 626 aaPredicted RBP11.73□□□□□ -0.53
VPS52-218ENST00000482399 IL21RQ9HBE5 538 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 MKKSQ9NPJ1 570 aaPredicted RBP11.73□□□□□ -0.53
VPS52-218ENST00000482399 CAMK2AQ9UQM7 478 aa11.73□□□□□ -0.53
VPS52-218ENST00000482399 MEIKINA0A087WXM9 373 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 OTOL1A6NHN0 477 aaPredicted RBP11.72□□□□□ -0.53
VPS52-218ENST00000482399 M6PRP20645 277 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 ART1P52961 327 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 IRF4Q15306 451 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 PRSS41Q7RTY9 318 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 SMARCD2Q92925 531 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 FBXW5Q969U6 566 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 MOAP1Q96BY2 351 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 MFFQ9GZY8 342 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 MCCC2Q9HCC0 563 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 WASH6PQ9NQA3 447 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 V9GY05 133 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 A0A087WV48 116 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 A0A1W2PQU0 124 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 C11orf98E9PRG8 122 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 DBIP07108 87 aaKnown RBP11.72□□□□□ -0.53
VPS52-218ENST00000482399 CDK2P24941 298 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 PTBP1P26599 531 aaKnown RBP eCLIP11.72□□□□□ -0.53
VPS52-218ENST00000482399 PSMD4P55036 377 aaKnown RBP11.72□□□□□ -0.53
VPS52-218ENST00000482399 ACTC1P68032 377 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 ACTA1P68133 377 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 ZNF85Q03923 595 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 PDGFRLQ15198 375 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 PRRT3Q5FWE3 981 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 SLC25A30Q5SVS4 291 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 TMEM81Q6P7N7 255 aa11.72□□□□□ -0.53
VPS52-218ENST00000482399 NSMAFQ92636 917 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms