RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 WFDC6Q9BQY6 131 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 TRIM2Q9C040 744 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 EVA1AQ9H8M9 152 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 C12orf10Q9HB07 376 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 EMC3Q9P0I2 261 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 MYO9AB2RTY4 2548 aa11.47□□□□□ -0.57
COL5A1-206ENST00000465877 CELSR1Q9NYQ6 3014 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 IGKV3D-15A0A087WSY6 115 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 A0A0B4J2E0 115 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 A0A1B0GX12 115 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 LIPT2A6NK58 231 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 ELOA3DA6NLF2 546 aaPredicted RBP11.46□□□□□ -0.57
COL5A1-206ENST00000465877 CCT8L1PA6NM43 557 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 ZNF724A8MTY0 619 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 A8MVM7 634 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 M0QX08 132 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 AIM2O14862 343 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 EIF1BO60739 113 aaKnown RBP11.46□□□□□ -0.57
COL5A1-206ENST00000465877 RAMP1O60894 148 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 NPIPB7O75200 414 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 AHSA1O95433 338 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 LGI1O95970 557 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 GPIP06744 558 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 EPXP11678 715 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 FPR1P21462 350 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 SLC16A1P53985 500 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 H3F3AP84243 136 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 EGR4Q05215 589 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 CEACAM7Q14002 265 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 VEZF1Q14119 521 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 OR7A5Q15622 319 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 NRF1Q16656 503 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 DUSP7Q16829 419 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 ELOA3BQ3SY89 546 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 C1orf140Q5VVS0 124 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 FAM91A1Q658Y4 838 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 PAQR6Q6TCH4 344 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 BEND4Q6ZU67 534 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 CCDC80Q76M96 950 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.46□□□□□ -0.57
COL5A1-206ENST00000465877 ELOA3Q8NG57 546 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 OR2T12Q8NG77 320 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 SLC26A7Q8TE54 656 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 RASSF5Q8WWW0 418 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 ZNF583Q96ND8 569 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 DACH2Q96NX9 599 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 GPATCH1Q9BRR8 931 aaKnown RBP11.46□□□□□ -0.57
COL5A1-206ENST00000465877 POTEKPQ9BYX7 375 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 KLHL4Q9C0H6 718 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 FANCFQ9NPI8 374 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 ADPRHL2Q9NX46 363 aa11.46□□□□□ -0.57
COL5A1-206ENST00000465877 RAI1Q7Z5J4 1906 aaPredicted RBP11.46□□□□□ -0.58
COL5A1-206ENST00000465877 NME4O00746 187 aa11.45□□□□□ -0.58
COL5A1-206ENST00000465877 TPST2O60704 377 aa11.45□□□□□ -0.58
COL5A1-206ENST00000465877 CTAG2O75638 210 aa11.45□□□□□ -0.58
COL5A1-206ENST00000465877 C8BP07358 591 aa11.45□□□□□ -0.58
COL5A1-206ENST00000465877 EDNRAP25101 427 aa11.45□□□□□ -0.58
COL5A1-206ENST00000465877 OR3A2P47893 321 aa11.45□□□□□ -0.58
COL5A1-206ENST00000465877 PDK3Q15120 406 aa11.45□□□□□ -0.58
COL5A1-206ENST00000465877 OR1Q1Q15612 314 aa11.45□□□□□ -0.58
COL5A1-206ENST00000465877 NPTX1Q15818 432 aa11.45□□□□□ -0.58
COL5A1-206ENST00000465877 LRRC23Q53EV4 343 aaPredicted RBP11.45□□□□□ -0.58
COL5A1-206ENST00000465877 OTUD3Q5T2D3 398 aaPredicted RBP11.45□□□□□ -0.58
COL5A1-206ENST00000465877 C8orf82Q6P1X6 216 aaPredicted RBP11.45□□□□□ -0.58
COL5A1-206ENST00000465877 HACD2Q6Y1H2 254 aa11.45□□□□□ -0.58
COL5A1-206ENST00000465877 GALNT5Q7Z7M9 940 aa11.45□□□□□ -0.58
COL5A1-206ENST00000465877 CCDC103Q8IW40 242 aa11.45□□□□□ -0.58
COL5A1-206ENST00000465877 GABRG1Q8N1C3 465 aa11.45□□□□□ -0.58
COL5A1-206ENST00000465877 OR4D11Q8NGI4 311 aa11.45□□□□□ -0.58
COL5A1-206ENST00000465877 VANGL1Q8TAA9 524 aaPredicted RBP11.45□□□□□ -0.58
COL5A1-206ENST00000465877 STK35Q8TDR2 534 aa11.45□□□□□ -0.58
COL5A1-206ENST00000465877 DNAJA4Q8WW22 397 aaPredicted RBP11.45□□□□□ -0.58
COL5A1-206ENST00000465877 CMTM5Q96DZ9 223 aa11.45□□□□□ -0.58
COL5A1-206ENST00000465877 MED18Q9BUE0 208 aa11.45□□□□□ -0.58
COL5A1-206ENST00000465877 PRR14Q9BWN1 585 aa11.45□□□□□ -0.58
COL5A1-206ENST00000465877 TAPBPLQ9BX59 468 aa11.45□□□□□ -0.58
COL5A1-206ENST00000465877 CLEC4MQ9H2X3 399 aaPredicted RBP11.45□□□□□ -0.58
COL5A1-206ENST00000465877 CMTM6Q9NX76 183 aa11.45□□□□□ -0.58
COL5A1-206ENST00000465877 NDRG3Q9UGV2 375 aa11.45□□□□□ -0.58
COL5A1-206ENST00000465877 IGKV1D-42A0A075B6H8 117 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 FAM221AA4D161 298 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 AQP7P3A6NL99 342 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 FTCDNL1E5RQL4 147 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 C16orf97H3BN30 126 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 FMO6PO60774 539 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 FZD7O75084 574 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 AKR7A3O95154 331 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 GOSR1O95249 250 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 PNMTP11086 282 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 PSMB1P20618 241 aaKnown RBP11.44□□□□□ -0.58
COL5A1-206ENST00000465877 GTF2E2P29084 291 aaKnown RBP11.44□□□□□ -0.58
COL5A1-206ENST00000465877 PRDX6P30041 224 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 RPS5P46782 204 aaKnown RBP11.44□□□□□ -0.58
COL5A1-206ENST00000465877 SLC7A2P52569 658 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 DAZAP2Q15038 168 aaPredicted RBP11.44□□□□□ -0.58
COL5A1-206ENST00000465877 SWT1Q5T5J6 900 aaKnown RBP11.44□□□□□ -0.58
COL5A1-206ENST00000465877 ULK3Q6PHR2 472 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 C5orf46Q6UWT4 87 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 STAC2Q6ZMT1 411 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 MICU2Q8IYU8 434 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms