RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 MFN2O95140 757 aa13.29□□□□□ -0.28
ATG4B-213ENST00000460211 GPIP06744 558 aa13.29□□□□□ -0.28
ATG4B-213ENST00000460211 PPP3CBP16298 524 aa13.29□□□□□ -0.28
ATG4B-213ENST00000460211 FPR1P21462 350 aa13.29□□□□□ -0.28
ATG4B-213ENST00000460211 PCGF2P35227 344 aa13.29□□□□□ -0.28
ATG4B-213ENST00000460211 SEC24CP53992 1094 aa13.29□□□□□ -0.28
ATG4B-213ENST00000460211 PCBP3P57721 371 aaKnown RBP13.29□□□□□ -0.28
ATG4B-213ENST00000460211 RGS8P57771 180 aaPredicted RBP13.29□□□□□ -0.28
ATG4B-213ENST00000460211 VMACQ2NL98 169 aa13.29□□□□□ -0.28
ATG4B-213ENST00000460211 ELOA3BQ3SY89 546 aa13.29□□□□□ -0.28
ATG4B-213ENST00000460211 ERICH5Q6P6B1 374 aa13.29□□□□□ -0.28
ATG4B-213ENST00000460211 NUFIP2Q7Z417 695 aaKnown RBP13.29□□□□□ -0.28
ATG4B-213ENST00000460211 GALNT5Q7Z7M9 940 aa13.29□□□□□ -0.28
ATG4B-213ENST00000460211 RANBP3LQ86VV4 465 aaPredicted RBP13.29□□□□□ -0.28
ATG4B-213ENST00000460211 LSMEM1Q8N8F7 131 aa13.29□□□□□ -0.28
ATG4B-213ENST00000460211 ELOA3Q8NG57 546 aa13.29□□□□□ -0.28
ATG4B-213ENST00000460211 STK35Q8TDR2 534 aa13.29□□□□□ -0.28
ATG4B-213ENST00000460211 DNAJA4Q8WW22 397 aaPredicted RBP13.29□□□□□ -0.28
ATG4B-213ENST00000460211 RASSF5Q8WWW0 418 aa13.29□□□□□ -0.28
ATG4B-213ENST00000460211 C3orf49Q96BT1 292 aa13.29□□□□□ -0.28
ATG4B-213ENST00000460211 DNAJA3Q96EY1 480 aa13.29□□□□□ -0.28
ATG4B-213ENST00000460211 GPATCH1Q9BRR8 931 aaKnown RBP13.29□□□□□ -0.28
ATG4B-213ENST00000460211 HDHD5Q9BXW7 423 aa13.29□□□□□ -0.28
ATG4B-213ENST00000460211 CLEC4MQ9H2X3 399 aaPredicted RBP13.29□□□□□ -0.28
ATG4B-213ENST00000460211 C12orf10Q9HB07 376 aa13.29□□□□□ -0.28
ATG4B-213ENST00000460211 RASSF1Q9NS23 344 aa13.29□□□□□ -0.28
ATG4B-213ENST00000460211 TESQ9UGI8 421 aaKnown RBP13.29□□□□□ -0.28
ATG4B-213ENST00000460211 PRRC2AP48634 2157 aaKnown RBP13.29□□□□□ -0.28
ATG4B-213ENST00000460211 TPST1O60507 370 aa13.28□□□□□ -0.28
ATG4B-213ENST00000460211 AHSA1O95433 338 aa13.28□□□□□ -0.28
ATG4B-213ENST00000460211 IFNA14P01570 189 aa13.28□□□□□ -0.28
ATG4B-213ENST00000460211 C8BP07358 591 aa13.28□□□□□ -0.28
ATG4B-213ENST00000460211 PNMTP11086 282 aa13.28□□□□□ -0.28
ATG4B-213ENST00000460211 LSP1P33241 339 aa13.28□□□□□ -0.28
ATG4B-213ENST00000460211 HOXC5Q00444 222 aa13.28□□□□□ -0.28
ATG4B-213ENST00000460211 CEACAM7Q14002 265 aa13.28□□□□□ -0.28
ATG4B-213ENST00000460211 RABL3Q5HYI8 236 aa13.28□□□□□ -0.28
ATG4B-213ENST00000460211 ABLIM2Q6H8Q1 611 aa13.28□□□□□ -0.28
ATG4B-213ENST00000460211 PAQR6Q6TCH4 344 aa13.28□□□□□ -0.28
ATG4B-213ENST00000460211 C5orf46Q6UWT4 87 aa13.28□□□□□ -0.28
ATG4B-213ENST00000460211 TFAP2EQ6VUC0 442 aa13.28□□□□□ -0.28
ATG4B-213ENST00000460211 ARPINQ7Z6K5 226 aa13.28□□□□□ -0.28
ATG4B-213ENST00000460211 ATG4DQ86TL0 474 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-213ENST00000460211 ZNF100Q8IYN0 542 aa13.28□□□□□ -0.28
ATG4B-213ENST00000460211 RNF217Q8TC41 542 aa13.28□□□□□ -0.28
ATG4B-213ENST00000460211 WFIKKN1Q96NZ8 548 aa13.28□□□□□ -0.28
ATG4B-213ENST00000460211 OR10A4Q9H209 315 aa13.28□□□□□ -0.28
ATG4B-213ENST00000460211 PIF1Q9H611 641 aa13.28□□□□□ -0.28
ATG4B-213ENST00000460211 EFCAB1Q9HAE3 211 aa13.28□□□□□ -0.28
ATG4B-213ENST00000460211 CCM2LQ9NUG4 571 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-213ENST00000460211 GPR52Q9Y2T5 361 aa13.28□□□□□ -0.28
ATG4B-213ENST00000460211 TESMINQ9Y4I5 508 aa13.28□□□□□ -0.28
ATG4B-213ENST00000460211 IGKV3D-15A0A087WSY6 115 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 ZC3H12DA2A288 527 aaKnown RBP13.27□□□□□ -0.29
ATG4B-213ENST00000460211 FAM221AA4D161 298 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 FXYD1O00168 92 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 IMPDH2P12268 514 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 COX4I1P13073 169 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 PSMB1P20618 241 aaKnown RBP13.27□□□□□ -0.29
ATG4B-213ENST00000460211 GTF2E2P29084 291 aaKnown RBP13.27□□□□□ -0.29
ATG4B-213ENST00000460211 OR3A2P47893 321 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 GNGT1P63211 74 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 H3F3AP84243 136 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 DMTNQ08495 405 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 BNIP2Q12982 314 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 P2RY6Q15077 328 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 OR7A5Q15622 319 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 GLIPR1L2Q4G1C9 344 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 ALG10BQ5I7T1 473 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 C1orf140Q5VVS0 124 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 ULK3Q6PHR2 472 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 POU5F2Q8N7G0 328 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 SMYD1Q8NB12 490 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 STEAP2Q8NFT2 490 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 ZNF775Q96BV0 537 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-213ENST00000460211 RCN3Q96D15 328 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 CMTM5Q96DZ9 223 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 SLC47A1Q96FL8 570 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 ZNF300Q96RE9 604 aaPredicted RBP13.27□□□□□ -0.29
ATG4B-213ENST00000460211 USB1Q9BQ65 265 aaKnown RBP13.27□□□□□ -0.29
ATG4B-213ENST00000460211 PARPBPQ9NWS1 579 aa13.27□□□□□ -0.29
ATG4B-213ENST00000460211 NOSIPQ9Y314 301 aaKnown RBP13.27□□□□□ -0.29
ATG4B-213ENST00000460211 A0A1B0GWA3 101 aa13.26□□□□□ -0.29
ATG4B-213ENST00000460211 LIPT2A6NK58 231 aa13.26□□□□□ -0.29
ATG4B-213ENST00000460211 NDUFAB1O14561 156 aa13.26□□□□□ -0.29
ATG4B-213ENST00000460211 AIM2O14862 343 aa13.26□□□□□ -0.29
ATG4B-213ENST00000460211 OR2T1O43869 369 aa13.26□□□□□ -0.29
ATG4B-213ENST00000460211 SNX3O60493 162 aa13.26□□□□□ -0.29
ATG4B-213ENST00000460211 MRPL33O75394 65 aaKnown RBP13.26□□□□□ -0.29
ATG4B-213ENST00000460211 CNOT4O95628 575 aaKnown RBP13.26□□□□□ -0.29
ATG4B-213ENST00000460211 LGI1O95970 557 aa13.26□□□□□ -0.29
ATG4B-213ENST00000460211 OPN1SWP03999 348 aa13.26□□□□□ -0.29
ATG4B-213ENST00000460211 KLK2P20151 261 aa13.26□□□□□ -0.29
ATG4B-213ENST00000460211 DRD4P21917 467 aa13.26□□□□□ -0.29
ATG4B-213ENST00000460211 IL32P24001 234 aa13.26□□□□□ -0.29
ATG4B-213ENST00000460211 GZMMP51124 257 aa13.26□□□□□ -0.29
ATG4B-213ENST00000460211 SLC16A1P53985 500 aa13.26□□□□□ -0.29
ATG4B-213ENST00000460211 VEZF1Q14119 521 aa13.26□□□□□ -0.29
ATG4B-213ENST00000460211 OTUD3Q5T2D3 398 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-213ENST00000460211 FAM91A1Q658Y4 838 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms