RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 LIPAP38571 399 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 PPP1R2P41236 205 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 MAGEA1P43355 309 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 HSPA7P48741 367 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 NPY2RP49146 381 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 EVX1P49640 407 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 GEMP55040 296 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 FOXA1P55317 472 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 CARD18P57730 90 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 TIRAPP58753 221 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 TAS2R40P59535 323 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 RAB10P61026 200 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 REEP5Q00765 189 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 ACVR1Q04771 509 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 PMS2P11Q13670 270 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 SPARCL1Q14515 664 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 C1QTNF12Q5T7M4 302 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 FBXW9Q5XUX1 488 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 PTRHD1Q6GMV3 140 aaKnown RBP4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 OR7E24Q6IFN5 339 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 NEPROQ6NW34 567 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 DUX4L9Q6RFH8 374 aaPredicted RBP4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 SPATA21Q7Z572 469 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 MAP7D3Q8IWC1 876 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 C1orf174Q8IYL3 243 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 GALNT4Q8N4A0 578 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 BEND2Q8NDZ0 799 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 OR4L1Q8NH43 312 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 ABHD5Q8WTS1 349 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 ISOC1Q96CN7 298 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 TRIM44Q96DX7 344 aaPredicted RBP4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 SNF8Q96H20 258 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 VAT1Q99536 393 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 PSD2Q9BQI7 771 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 FAM167BQ9BTA0 163 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 KATNB1Q9BVA0 655 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 CHID1Q9BWS9 393 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 SRXN1Q9BYN0 137 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 GBA3Q9H227 469 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 CXorf21Q9HAI6 301 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 SLC17A5Q9NRA2 495 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 SLC7A10Q9NS82 523 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 KLHL8Q9P2G9 620 aaPredicted RBP4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 DUX4Q9UBX2 424 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 SLC2A6Q9UGQ3 507 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 WIPI2Q9Y4P8 454 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 USH1CQ9Y6N9 552 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 C9JVG2 144 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 TO15178 435 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 SYNGR3O43761 229 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 TSPAN2O60636 221 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 FGFR1OPO95684 399 aaKnown RBP4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 SYF2O95926 243 aaKnown RBP4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 IL6RP08887 468 aaPredicted RBP4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 CT62P0C5K7 136 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 NR2F6P10588 404 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 KRT4P19013 534 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 CDH2P19022 906 aaPredicted RBP4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 SAT1P21673 171 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 SHC1P29353 583 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 CXCR5P32302 372 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 KIR2DS4P43632 304 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 KLK7P49862 253 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 PLA2G16P53816 162 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 TPTEP56180 551 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 BPIFB3P59826 476 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 POLR2FP61218 127 aaKnown RBP4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 STXBP1P61764 594 aaKnown RBP4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 SUMO2P61956 95 aaKnown RBP4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 SLC35A2P78381 396 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 PLIN5Q00G26 463 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 NAAAQ02083 359 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 BST1Q10588 318 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 LCP2Q13094 533 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 NAE1Q13564 534 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 RCN2Q14257 317 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 POU6F1Q14863 301 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 HEPACAMQ14CZ8 416 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 RABEP1Q15276 862 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 FAM153CQ494X1 144 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 HBMQ6B0K9 141 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 ATL3Q6DD88 541 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 AGTRAPQ6RW13 159 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 AFTPHQ6ULP2 937 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 GDPGP1Q6ZNW5 385 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 KCTD20Q7Z5Y7 419 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 LDLRAD3Q86YD5 345 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 KLHDC1Q8N7A1 406 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 OR2L5Q8NG80 312 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 OR4K17Q8NGC6 315 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 TFB1MQ8WVM0 346 aaKnown RBP4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 ANKRD7Q92527 254 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 NEIL2Q969S2 332 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 ZNF778Q96MU6 729 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 HIST1H2AAQ96QV6 131 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 CITED2Q99967 270 aaPredicted RBP4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 DPCDQ9BVM2 203 aaPredicted RBP4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 WDR12Q9GZL7 423 aaKnown RBP4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 STEAP1Q9UHE8 339 aa4.31□□□□□ -1.72
SBDSP1-204ENST00000453858 KCNG2Q9UJ96 466 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms