RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 ZNF540Q8NDQ6 660 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 DEFB124Q8NES8 71 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 BPIFB6Q8NFQ5 453 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 NLGN4YQ8NFZ3 816 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 OR2T33Q8NG76 320 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 OR11G2Q8NGC1 345 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 OR5W2Q8NH69 310 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 B4GALNT2Q8NHY0 566 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF563Q8TA94 476 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 BRIX1Q8TDN6 353 aaKnown RBP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 GRHL3Q8TE85 626 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 DUSP19Q8WTR2 217 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 CT55Q8WUE5 264 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 TMEM255BQ8WV15 326 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 TMEM234Q8WY98 164 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 ST8SIA1Q92185 356 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 RFKQ969G6 155 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 C8orf44Q96CB5 159 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 BPIFA2Q96DR5 249 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 SPACA9Q96E40 222 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 ARSGQ96EG1 525 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 RCC1LQ96I51 464 aaKnown RBP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 PLEKHA8Q96JA3 519 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 SECISBP2Q96T21 854 aaKnown RBP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 TMEM43Q9BTV4 400 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF426Q9BUY5 554 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 POLDIP3Q9BY77 421 aaKnown RBP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 SPRY4Q9C004 299 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 DUSP21Q9H596 190 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 AKIRIN1Q9H9L7 192 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZBTB20Q9HC78 741 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 CTPS2Q9NRF8 586 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 RASSF1Q9NS23 344 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 TBC1D23Q9NUY8 699 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF226Q9NYT6 803 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 IL20Q9NYY1 176 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 CNOT2Q9NZN8 540 aaKnown RBP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 FLRT3Q9NZU0 649 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 PSORS1C1Q9UIG5 152 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF223Q9UK11 482 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 ICAM5Q9UMF0 924 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 RNF6Q9Y252 685 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 CARD8Q9Y2G2 431 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 NTNG1Q9Y2I2 539 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF281Q9Y2X9 895 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 RPL36Q9Y3U8 105 aaKnown RBP3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 PCDHGB1Q9Y5G3 927 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 HS3ST3B1Q9Y662 390 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 DMDP11532 3685 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 CEP250Q9BV73 2442 aa3.62□□□□□ -1.83
HMGB1P37-201ENST00000439613 PCNX3Q9H6A9 2034 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 PTPRZ1P23471 2315 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 CNTRLQ7Z7A1 2325 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 DOCK10Q96BY6 2186 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 TRAV36DV7A0A075B6V5 113 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 A0A087WZY1 265 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 IGLV3-32A0A0A0MS00 114 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 TEX51A0A1B0GUA7 166 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 ANKUB1A6NFN9 424 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 TMEM200CA6NKL6 621 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 RIIAD1A6NNX1 92 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 CLCA1A8K7I4 914 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 ZNF701M0R085 212 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 WWP2O00308 870 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 SOCS6O14544 535 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 SCO2O43819 266 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 IDH3BO43837 385 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 PRKNO60260 465 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 RAD1O60671 282 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 PTP4A3O75365 173 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 WBP4O75554 376 aaKnown RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 OR2J2O76002 312 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 OR7A10O76100 309 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 SOX14O95416 240 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 NADKO95544 446 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 NUDT14O95848 222 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 IFNGP01579 166 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 THY1P04216 161 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 HIST1H2ABP04908 130 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 SERPINA7P05543 415 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 FTH1P19P0C7X4 201 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 SAGP10523 405 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 PIPP12273 146 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 CEACAM1P13688 526 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 GABRB1P18505 474 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 PAICSP22234 425 aaKnown RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 FMO3P31513 532 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 SLC6A6P31641 620 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 OTX2P32243 289 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 DLSTP36957 453 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 APOBEC1P41238 236 aaKnown RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 EIF1P41567 113 aaKnown RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 GPR4P46093 362 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 ALDH3B2P48448 385 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 SSR4P51571 173 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 POLR2HP52434 150 aaKnown RBP3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 DLX5P56178 289 aa3.61□□□□□ -1.83
HMGB1P37-201ENST00000439613 FBXW4P57775 412 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms