RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 UFD1Q92890 307 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 KTI12Q96EK9 354 aaPredicted RBP17.25■□□□□ 0.35
USP39-202ENST00000409025 ZNF649Q9BS31 505 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 TAS2R10Q9NYW0 307 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 MYOTQ9UBF9 498 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 SSR3Q9UNL2 185 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 ADAM18Q9Y3Q7 739 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 EXPH5Q8NEV8 1989 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 C12orf71A8MTZ7 269 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 SLC25A12O75746 678 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 ASAH2BP0C7U1 165 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 OPRL1P41146 370 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 AQP2P41181 271 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 CRYBB2P43320 205 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 TMED10P49755 219 aaKnown RBP17.25■□□□□ 0.35
USP39-202ENST00000409025 C17orf67Q0P5P2 114 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 TPBGQ13641 420 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 COL28A1Q2UY09 1125 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 POMZP3Q6PJE2 187 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 MOSPD2Q8NHP6 518 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 MCFD2Q8NI22 146 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 SLC22A8Q8TCC7 542 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 TM9SF4Q92544 642 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 TTC9Q92623 222 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 DEFB126Q9BYW3 111 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 NDEL1Q9GZM8 345 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 INPP5EQ9NRR6 644 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 HAO2Q9NYQ3 351 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 CCDC59Q9P031 241 aaKnown RBP17.25■□□□□ 0.35
USP39-202ENST00000409025 SLC6A5Q9Y345 797 aa17.25■□□□□ 0.35
USP39-202ENST00000409025 ADAM10O14672 748 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 HIST1H2ABP04908 130 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 CLUP10909 449 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 CD79BP40259 229 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 ERVK-25P63136 954 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 LTBQ06643 244 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 POU4F2Q12837 409 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 PCOLCEQ15113 449 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 DCAF12Q5T6F0 453 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 FAM69BQ5VUD6 431 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 TMPRSS11AQ6ZMR5 421 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 HIST3H2AQ7L7L0 130 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 GRINAQ7Z429 371 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 SLC15A4Q8N697 577 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 GALNT6Q8NCL4 622 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 OR6Q1Q8NGQ2 317 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 S100ZQ8WXG8 99 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 HIST1H2ACQ93077 130 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 TAAR8Q969N4 342 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 KATNB1Q9BVA0 655 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 STRADBQ9C0K7 418 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 FKRPQ9H9S5 495 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 KLHL1Q9NR64 748 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 ZNF229Q9UJW7 825 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 CAB39Q9Y376 341 aaPredicted RBP17.24■□□□□ 0.35
USP39-202ENST00000409025 PCDHGB6Q9Y5F9 930 aa17.24■□□□□ 0.35
USP39-202ENST00000409025 TRAV36DV7A0A075B6V5 113 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 TEX51A0A1B0GUA7 166 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 DAPL1A0PJW8 107 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 AKAP8O43823 692 aaKnown RBP17.23■□□□□ 0.35
USP39-202ENST00000409025 UMODP07911 640 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 RPS5P46782 204 aaKnown RBP17.23■□□□□ 0.35
USP39-202ENST00000409025 ACSM1Q08AH1 577 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 BTBD16Q32M84 506 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 ZNF791Q3KP31 576 aaPredicted RBP17.23■□□□□ 0.35
USP39-202ENST00000409025 ZNF404Q494X3 552 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 CCDC157Q569K6 752 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 ALG10Q5BKT4 473 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 ZNF517Q6ZMY9 492 aaPredicted RBP17.23■□□□□ 0.35
USP39-202ENST00000409025 NANOGNBQ7Z5D8 188 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 TMEM99Q8N816 258 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 SPRYD4Q8WW59 207 aaPredicted RBP17.23■□□□□ 0.35
USP39-202ENST00000409025 TMEM234Q8WY98 164 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 DACH2Q96NX9 599 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 MMP27Q9H306 513 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 FBXL4Q9UKA2 621 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 LOXL2Q9Y4K0 774 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 MPDZO75970 2070 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 TMED7-TICAM2A0A0A6YYA0 188 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 METTL15A6NJ78 407 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 CLDN25C9JDP6 229 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 GYPBP06028 91 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 SBK2P0C263 348 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 HTR3AP46098 478 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 RAB15P59190 212 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 LGALS3BPQ08380 585 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 ZNF846Q147U1 533 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 ZNF322Q6U7Q0 402 aaPredicted RBP17.23■□□□□ 0.35
USP39-202ENST00000409025 COL27A1Q8IZC6 1860 aaPredicted RBP17.23■□□□□ 0.35
USP39-202ENST00000409025 LRRC75AQ8NAA5 344 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 OR10H4Q8NGA5 316 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 ELP5Q8TE02 316 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 ALG8Q9BVK2 526 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 ADGRL4Q9HBW9 690 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 HMG20AQ9NP66 347 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 TMED7Q9Y3B3 224 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 B3GALT1Q9Y5Z6 326 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 A3GALT2U3KPV4 340 aa17.23■□□□□ 0.35
USP39-202ENST00000409025 IGHV1-45A0A0A0MS14 117 aa17.22■□□□□ 0.35
USP39-202ENST00000409025 ANKUB1A6NFN9 424 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms