RNA–Protein interactions for RNA: ENST00000363016.1

RNU6-249P-201, Transcript of RNA, U6 small nuclear 249, pseudogene, humanhuman

BASIC

Gene RNU6-249P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-249P-201ENST00000363016 SLC38A3Q99624 504 aa4.84□□□□□ -1.63
RNU6-249P-201ENST00000363016 TIMP4Q99727 224 aa4.84□□□□□ -1.63
RNU6-249P-201ENST00000363016 NDUFAF3Q9BU61 184 aa4.84□□□□□ -1.63
RNU6-249P-201ENST00000363016 SPANXB1Q9NS25 103 aaPredicted RBP4.84□□□□□ -1.63
RNU6-249P-201ENST00000363016 B3GNT2Q9NY97 397 aa4.84□□□□□ -1.63
RNU6-249P-201ENST00000363016 BFARQ9NZS9 450 aa4.84□□□□□ -1.63
RNU6-249P-201ENST00000363016 ZNF223Q9UK11 482 aaPredicted RBP4.84□□□□□ -1.63
RNU6-249P-201ENST00000363016 SH2B3Q9UQQ2 575 aa4.84□□□□□ -1.63
RNU6-249P-201ENST00000363016 FCF1Q9Y324 198 aaKnown RBP4.84□□□□□ -1.63
RNU6-249P-201ENST00000363016 HS3ST3A1Q9Y663 406 aa4.84□□□□□ -1.63
RNU6-249P-201ENST00000363016 SMARCA4P51532 1647 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 CAMSAP1Q5T5Y3 1602 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 CAMSAP2Q08AD1 1489 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 ATP10DQ9P241 1426 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 KTN1Q86UP2 1357 aaKnown RBP4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 OR6C6A6NF89 314 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 MANSC4A6NHS7 340 aaPredicted RBP4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 MYMKA6NI61 221 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 SHISA7A6NL88 538 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 NPIPB5A8MRT5 1133 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 FTCDNL1E5RQL4 147 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 CASKO14936 926 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 SIGLEC5O15389 551 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 RGS5O15539 181 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 RAD51CO43502 376 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 CHST10O43529 356 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 PRAF2O60831 178 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 PAPSS2O95340 614 aaPredicted RBP4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 HLA-AP01891 365 aaKnown RBP4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 NR3C1P04150 777 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 IFNW1P05000 195 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 ADH4P08319 380 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 HOXD4P09016 255 aaPredicted RBP4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 DANCRP0C864 163 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 FCER1AP12319 257 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 BMP3P12645 472 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 ETFAP13804 333 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 HGFP14210 728 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 GP9P14770 177 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 HIST1H1CP16403 213 aaKnown RBP4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 FPR2P25090 351 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 GDF1P27539 372 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 CD1CP29017 333 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 ADORA1P30542 326 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 QARSP47897 775 aaKnown RBP4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 DAP3P51398 398 aaKnown RBP4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 RABGGTBP53611 331 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 KLF3P57682 345 aaPredicted RBP4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 DNAJB13P59910 316 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 RPS20P60866 119 aaKnown RBP4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 RAE1P78406 368 aaKnown RBP4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 MRPS34P82930 218 aaKnown RBP4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 CTBSQ01459 385 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 EMX2Q04743 252 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 FOXE3Q13461 319 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 EXOSC2Q13868 293 aaKnown RBP4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 ZNF385BQ569K4 471 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 SFT2D3Q587I9 215 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 C19orf54Q5BKX5 351 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 EMC4Q5J8M3 183 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 ATAD3CQ5T2N8 411 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 SYT6Q5T7P8 510 aaPredicted RBP4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 SAXO2Q658L1 398 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 TMEM42Q69YG0 159 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 TYW3Q6IPR3 259 aaKnown RBP4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 SLC27A4Q6P1M0 643 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 CD200R1LQ6Q8B3 271 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 LCLAT1Q6UWP7 414 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 C19orf35Q6ZS72 473 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 PRSS45Q7RTY3 260 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 DHDDSQ86SQ9 333 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 TMPRSS11BQ86T26 416 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 PARGQ86W56 976 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 WFDC3Q8IUB2 231 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 APRG1Q8IVJ8 170 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 SDR9C7Q8NEX9 313 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 OR10G3Q8NGC4 313 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 OR5L2Q8NGL0 311 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 OR4D5Q8NGN0 318 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 OR4Q3Q8NH05 313 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 OR52I2Q8NH67 350 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 MAPK15Q8TD08 544 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 ABHD3Q8WU67 409 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 TNFAIP8L1Q8WVP5 186 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 EDARADDQ8WWZ3 215 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 RGP1Q92546 391 aaPredicted RBP4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 NPIPB3Q92617 1050 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 FKBP10Q96AY3 582 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 MOB3AQ96BX8 217 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 ZBED6CLQ96FA7 236 aaPredicted RBP4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 NARS2Q96I59 477 aaKnown RBP4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 ITCHQ96J02 903 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 TXNDC15Q96J42 360 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 ZNF75AQ96N20 296 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 GUCD1Q96NT3 240 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 OR2M2Q96R28 347 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 ZSWIM1Q9BR11 485 aa4.83□□□□□ -1.64
RNU6-249P-201ENST00000363016 HDAC8Q9BY41 377 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms