RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 GRPP07492 148 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 CEBPDP49716 269 aaPredicted RBP11.3□□□□□ -0.6
PCF11-201ENST00000298281 PCBD1P61457 104 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 CDCA3Q99618 268 aaPredicted RBP11.3□□□□□ -0.6
PCF11-201ENST00000298281 CENPOQ9BU64 300 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 HSD3B7Q9H2F3 369 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 GAL3ST2Q9H3Q3 398 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 HEATR5BQ9P2D3 2071 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 TRPM6Q9BX84 2022 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 GLCEO94923 617 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 SUB1P53999 127 aaKnown RBP eCLIP11.3□□□□□ -0.6
PCF11-201ENST00000298281 GDPD3Q7L5L3 318 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 TRIM73Q86UV7 250 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 FUNDC2Q9BWH2 189 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 ACSS1Q9NUB1 689 aaPredicted RBP11.3□□□□□ -0.6
PCF11-201ENST00000298281 EMC9Q9Y3B6 208 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 MAP1BP46821 2468 aaKnown RBP11.3□□□□□ -0.6
PCF11-201ENST00000298281 SURF4O15260 269 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 EFSO43281 561 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 NXPH2O95156 264 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 PPP1R3DO95685 299 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 FDXRP22570 491 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 UBE2G1P62253 170 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 SNRPD2P62316 118 aaKnown RBP11.3□□□□□ -0.6
PCF11-201ENST00000298281 SMAD2Q15796 467 aaKnown RBP11.3□□□□□ -0.6
PCF11-201ENST00000298281 TMEM236Q5W0B7 351 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 OR5M10Q6IEU7 315 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 ZNF417Q8TAU3 575 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 BLACEA4D250 179 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 AQP7P3A6NL99 342 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 ADAM12O43184 909 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 GJB5O95377 273 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 OSMP13725 252 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 PLAURQ03405 335 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 ZNF684Q5T5D7 378 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 ANKRD54Q6NXT1 300 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 SERPINA11Q86U17 422 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 L3HYPDHQ96EM0 354 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 SGPP1Q9BX95 441 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 TWSG1Q9GZX9 223 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 PRELID3BQ9Y3B1 194 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 PHLPP1O60346 1717 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 UBR1Q8IWV7 1749 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 SOCS6O14544 535 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 SLC35E2BP0CK96 405 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 SLC1A3P43003 542 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 THNSL2Q86YJ6 484 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 ADGRF3Q8IZF5 1079 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 LINC01599Q8WXQ3 324 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 C14orf119Q9NWQ9 140 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 SRPK3Q9UPE1 567 aa11.3□□□□□ -0.6
PCF11-201ENST00000298281 PRKACAP17612 351 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 DRD1P21728 446 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 SHC2P98077 582 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 GLO1Q04760 184 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 OLIG2Q13516 323 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 CAMK2BQ13554 666 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 CPEB3Q8NE35 698 aaKnown RBP11.29□□□□□ -0.6
PCF11-201ENST00000298281 CHDHQ8NE62 594 aaPredicted RBP11.29□□□□□ -0.6
PCF11-201ENST00000298281 OR4Q3Q8NH05 313 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 ZFAND1Q8TCF1 268 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 ADAMTS19Q8TE59 1207 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 TANKQ92844 425 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 ERVMER34-1Q9H9K5 563 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 ISYNA1Q9NPH2 558 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 MCRIP1C9JLW8 97 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 FOXE1O00358 373 aaPredicted RBP11.29□□□□□ -0.6
PCF11-201ENST00000298281 PROS1P07225 676 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 GIFP27352 417 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 GATMP50440 423 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 METTL11BQ5VVY1 283 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 PLBD1Q6P4A8 553 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 Q6ZRG5 221 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 ACVR1CQ8NER5 493 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 SECTM1Q8WVN6 248 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 NXPE3Q969Y0 559 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 EGLN1Q9GZT9 426 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 CALHM2Q9HA72 323 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 KCMF1Q9P0J7 381 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 SLC35A3Q9Y2D2 325 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 CKAP5Q14008 2032 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 HIDE1A8MVS5 230 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 PTTG1O95997 202 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 RNASE1P07998 156 aaKnown RBP11.29□□□□□ -0.6
PCF11-201ENST00000298281 STSP08842 583 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 CBR1P16152 277 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 ETV6P41212 452 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 CATR1Q13166 79 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 GLIS1Q8NBF1 620 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 OR6T1Q8NGN1 323 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 OR1J2Q8NGS2 313 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 RIMS4Q9H426 269 aaPredicted RBP11.29□□□□□ -0.6
PCF11-201ENST00000298281 PRAF2O60831 178 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 UBCP0CG48 685 aaKnown RBP11.29□□□□□ -0.6
PCF11-201ENST00000298281 HNRNPA2B1P22626 353 aaKnown RBP11.29□□□□□ -0.6
PCF11-201ENST00000298281 HTR5AP47898 357 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 PROX2Q3B8N5 592 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 DCAF12Q5T6F0 453 aa11.29□□□□□ -0.6
PCF11-201ENST00000298281 RPS27LQ71UM5 84 aaKnown RBP11.29□□□□□ -0.6
PCF11-201ENST00000298281 ZC3H3Q8IXZ2 948 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms