RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 PHOSPHO1Q8TCT1 267 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 ACOT12Q8WYK0 555 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 ZNF524Q96C55 264 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 CNN2Q99439 309 aaKnown RBP16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 EVA1AQ9H8M9 152 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 MOV10Q9HCE1 1003 aaKnown RBP16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 RBFOX1Q9NWB1 397 aaKnown RBP16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 GNG8Q9UK08 70 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 BOLA1Q9Y3E2 137 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 A0A0G2JK05 382 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 TFPIP10646 304 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 HPGDP15428 266 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 NME1P15531 152 aaKnown RBP16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 HSD17B7P56937 341 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 TAS2R43P59537 309 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 TATDN3Q17R31 274 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 KLHL26Q53HC5 615 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 GKN2Q86XP6 184 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 SLC35F2Q8IXU6 374 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 PRR22Q8IZ63 422 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 ABCA7Q8IZY2 2146 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 SLC2A12Q8TD20 617 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 SNX33Q8WV41 574 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 SLC7A6Q92536 515 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 OR8D2Q9GZM6 311 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 PDE7BQ9NP56 450 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 COPS3Q9UNS2 423 aa16.8■□□□□ 0.28
SHKBP1-201ENST00000291842 IGKV1D-42A0A075B6H8 117 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 SC5DO75845 299 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 DDOSTP39656 456 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 PSMD4P55036 377 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 NRG3P56975 720 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 RAB25P57735 213 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 POU4F2Q12837 409 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 PON3Q15166 354 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 APOOLQ6UXV4 268 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 PXKQ7Z7A4 578 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 NPEPL1Q8NDH3 523 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 PTPMT1Q8WUK0 201 aaPredicted RBP16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 THAP4Q8WY91 577 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 PDCD1LG2Q9BQ51 273 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 CYSLTR2Q9NS75 346 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 ACOXLQ9NUZ1 547 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 ICAM5Q9UMF0 924 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 A0A1B0GVT2 93 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 IDSB3KWA1 339 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 GUSBP08236 651 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 GDI2P50395 445 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 MZT2BQ6NZ67 158 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 TRILQ7L0X0 811 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 CMIPQ8IY22 773 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 TRMT10AQ8TBZ6 339 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 TSLPQ969D9 159 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 UPRTQ96BW1 309 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 ORAI1Q96D31 301 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 NXF5Q9H1B4 397 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 UCKL1Q9NWZ5 548 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 DHCR7Q9UBM7 475 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 ZNF337Q9Y3M9 751 aa16.79■□□□□ 0.28
SHKBP1-201ENST00000291842 ELOA3DA6NLF2 546 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 C17orf51A8MQB3 221 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 OR7A10O76100 309 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 AQP2P41181 271 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 MRPS15P82914 257 aaKnown RBP16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 ELOA3BQ3SY89 546 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 SNAP47Q5SQN1 464 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 DPY19L2P2Q6ZN68 376 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 LRRC28Q86X40 367 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 C7orf57Q8NEG2 295 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 ELOA3Q8NG57 546 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 OR5H6Q8NGV6 325 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 HSPA12BQ96MM6 686 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 MOGAT1Q96PD6 335 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 TSSK2Q96PF2 358 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 KCNJ15Q99712 375 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 NRSN2Q9GZP1 204 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 KLHL21Q9UJP4 597 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 NOX1Q9Y5S8 564 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 ASXL3Q9C0F0 2248 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 TEX13CA0A0J9YWL9 993 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 A0A1W2PR77 199 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 CDC14CA4D256 554 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 CENPXA8MT69 81 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 OR2T7P0C7T2 308 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 SPI1P17947 270 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 TCEA1P23193 301 aaKnown RBP16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 TALDO1P37837 337 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 RIN1Q13671 783 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 RNASE12Q5GAN4 147 aaKnown RBP16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 PRSS58Q8IYP2 241 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 GPR135Q8IZ08 494 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 OR2T27Q8NH04 317 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 SLC35B4Q969S0 331 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 Q96M85 177 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 ZNF285Q96NJ3 590 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 OR14A2Q96R54 314 aa16.78■□□□□ 0.28
SHKBP1-201ENST00000291842 TRBV2A0A0J9YWF9 115 aa16.77■□□□□ 0.28
SHKBP1-201ENST00000291842 FAM157BP0CG42 384 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms