RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 MYOTQ9UBF9 498 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 GNG12Q9UBI6 72 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 LRP6O75581 1613 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 FUOMA2VDF0 154 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 MCRIP1C9JLW8 97 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 H3BNC9 293 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 SOCS6O14544 535 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 RETP07949 1114 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 KIR2DL3P43628 341 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 TNK1Q13470 666 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 KEAP1Q14145 624 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 VN1R2Q8NFZ6 395 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 OR13J1Q8NGT2 312 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 BOD1Q96IK1 185 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 MMP28Q9H239 520 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 PRDM9Q9NQV7 894 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 GFOD1Q9NXC2 390 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 DHCR7Q9UBM7 475 aaKnown RBP12.34□□□□□ -0.43
COL1A1-201ENST00000225964 KCND3Q9UK17 655 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 GABARAPH6UMI1 98 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 GABARAPO95166 117 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 TK1P04183 234 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 DTWD1Q8N5C7 304 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 C12orf45Q8N5I9 185 aaPredicted RBP12.34□□□□□ -0.43
COL1A1-201ENST00000225964 SUMF2Q8NBJ7 301 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 SLC19A3Q9BZV2 496 aa12.34□□□□□ -0.43
COL1A1-201ENST00000225964 KLRC4-KLRK1H3BQV0 150 aa12.33□□□□□ -0.43
COL1A1-201ENST00000225964 SNNO75324 88 aaPredicted RBP12.33□□□□□ -0.43
COL1A1-201ENST00000225964 UTS2O95399 124 aa12.33□□□□□ -0.43
COL1A1-201ENST00000225964 GSTP1P09211 210 aaKnown RBP12.33□□□□□ -0.43
COL1A1-201ENST00000225964 PRDX3P30048 256 aaKnown RBP12.33□□□□□ -0.43
COL1A1-201ENST00000225964 PRKAR1BP31321 381 aa12.33□□□□□ -0.43
COL1A1-201ENST00000225964 CSNK1DP48730 415 aa12.33□□□□□ -0.43
COL1A1-201ENST00000225964 VEGFCP49767 419 aa12.33□□□□□ -0.43
COL1A1-201ENST00000225964 EDDM3BP56851 147 aa12.33□□□□□ -0.43
COL1A1-201ENST00000225964 AKR1C1Q04828 323 aa12.33□□□□□ -0.43
COL1A1-201ENST00000225964 CDK5R2Q13319 367 aa12.33□□□□□ -0.43
COL1A1-201ENST00000225964 TBC1D28Q2M2D7 210 aa12.33□□□□□ -0.43
COL1A1-201ENST00000225964 SLC6A19Q695T7 634 aa12.33□□□□□ -0.43
COL1A1-201ENST00000225964 OR7G2Q8NG99 324 aa12.33□□□□□ -0.43
COL1A1-201ENST00000225964 OR13C2Q8NGS9 318 aa12.33□□□□□ -0.43
COL1A1-201ENST00000225964 TMEM163Q8TC26 289 aa12.33□□□□□ -0.43
COL1A1-201ENST00000225964 SMIM14Q96QK8 99 aa12.33□□□□□ -0.43
COL1A1-201ENST00000225964 PRSS16Q9NQE7 514 aa12.33□□□□□ -0.43
COL1A1-201ENST00000225964 PRELID1Q9Y255 219 aa12.33□□□□□ -0.43
COL1A1-201ENST00000225964 SEC14L2O76054 403 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 AOAHP28039 575 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 MGAT3Q09327 533 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 GPR176Q14439 515 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 SERPINA11Q86U17 422 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 GDPD1Q8N9F7 314 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 THOC3Q96J01 351 aaKnown RBP12.33□□□□□ -0.44
COL1A1-201ENST00000225964 MRI1Q9BV20 369 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 C1orf198Q9H425 327 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 SAV1Q9H4B6 383 aaPredicted RBP12.33□□□□□ -0.44
COL1A1-201ENST00000225964 METTL15A6NJ78 407 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 NCR1O76036 304 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 NXPH3O95157 252 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 HABP2Q14520 560 aaPredicted RBP12.33□□□□□ -0.44
COL1A1-201ENST00000225964 SYPL1Q16563 259 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 OR8J2Q8NGG1 315 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 PAQR8Q8TEZ7 354 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 MRPL38Q96DV4 380 aaKnown RBP12.33□□□□□ -0.44
COL1A1-201ENST00000225964 PBX4Q9BYU1 374 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 LHX3Q9UBR4 397 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 INTS6Q9UL03 887 aaKnown RBP12.33□□□□□ -0.44
COL1A1-201ENST00000225964 LOC285095A0A1B0GVY8 99 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 BTBD17A6NE02 478 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 SORBS2O94875 1100 aaKnown RBP12.33□□□□□ -0.44
COL1A1-201ENST00000225964 GSCP56915 257 aaPredicted RBP12.33□□□□□ -0.44
COL1A1-201ENST00000225964 TSSK4Q6SA08 328 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 OR51D1Q8NGF3 324 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 ZBTB8AQ96BR9 441 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 THAP7Q9BT49 309 aaPredicted RBP12.33□□□□□ -0.44
COL1A1-201ENST00000225964 EPHX3Q9H6B9 360 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 KRBA1A5PL33 1030 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 A6NIN4 97 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 WASH4PA8MWX3 477 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 ADAM12O43184 909 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 NXPH2O95156 264 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 ITGB2P05107 769 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 IL3RAP26951 378 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 THBS3P49746 956 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 FAM69AQ5T7M9 428 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 PLAG1Q6DJT9 500 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 CLEC14AQ86T13 490 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 BSCL2Q96G97 398 aaPredicted RBP12.33□□□□□ -0.44
COL1A1-201ENST00000225964 NTMT1Q9BV86 223 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 COQ3Q9NZJ6 369 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 DNAJC25-GNG10A0A024R161 153 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 TMEM189-UBE2V1I3L0A0 370 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 GPR137BO60478 399 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 OR7C1O76099 320 aaPredicted RBP12.33□□□□□ -0.44
COL1A1-201ENST00000225964 CATR1Q13166 79 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 DUSP7Q16829 419 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 PGGHGQ32M88 737 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 IFI44Q8TCB0 444 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 UBL7Q96S82 380 aaPredicted RBP12.33□□□□□ -0.44
COL1A1-201ENST00000225964 EVA1AQ9H8M9 152 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 MED20Q9H944 212 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms