RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 ZNF3P17036 446 aa16.48■□□□□ 0.23
VIM-201ENST00000224237 PCSK6P29122 969 aa16.48■□□□□ 0.23
VIM-201ENST00000224237 MTNR1AP48039 350 aa16.48■□□□□ 0.23
VIM-201ENST00000224237 MLF1P58340 268 aa16.48■□□□□ 0.23
VIM-201ENST00000224237 RAB40BQ12829 278 aa16.48■□□□□ 0.23
VIM-201ENST00000224237 CHAF1BQ13112 559 aa16.48■□□□□ 0.23
VIM-201ENST00000224237 SLC35F1Q5T1Q4 408 aa16.48■□□□□ 0.23
VIM-201ENST00000224237 POMZP3Q6PJE2 187 aa16.48■□□□□ 0.23
VIM-201ENST00000224237 TMPRSS12Q86WS5 348 aa16.48■□□□□ 0.23
VIM-201ENST00000224237 GID4Q8IVV7 300 aa16.48■□□□□ 0.23
VIM-201ENST00000224237 KTI12Q96EK9 354 aaPredicted RBP16.48■□□□□ 0.23
VIM-201ENST00000224237 CPNE5Q9HCH3 593 aa16.48■□□□□ 0.23
VIM-201ENST00000224237 P4HTMQ9NXG6 502 aa16.48■□□□□ 0.23
VIM-201ENST00000224237 MED11Q9P086 117 aa16.48■□□□□ 0.23
VIM-201ENST00000224237 H2AFY2Q9P0M6 372 aaPredicted RBP16.48■□□□□ 0.23
VIM-201ENST00000224237 ZNF229Q9UJW7 825 aa16.48■□□□□ 0.23
VIM-201ENST00000224237 HIF3AQ9Y2N7 669 aa16.48■□□□□ 0.23
VIM-201ENST00000224237 TMED7Q9Y3B3 224 aa16.48■□□□□ 0.23
VIM-201ENST00000224237 MPDZO75970 2070 aa16.48■□□□□ 0.23
VIM-201ENST00000224237 CEP250Q9BV73 2442 aa16.47■□□□□ 0.23
VIM-201ENST00000224237 RIIAD1A6NNX1 92 aa16.47■□□□□ 0.23
VIM-201ENST00000224237 M0R3G1 203 aa16.47■□□□□ 0.23
VIM-201ENST00000224237 SUSD5O60279 629 aa16.47■□□□□ 0.23
VIM-201ENST00000224237 IFNGP01579 166 aa16.47■□□□□ 0.23
VIM-201ENST00000224237 ASAH2BP0C7U1 165 aa16.47■□□□□ 0.23
VIM-201ENST00000224237 PRKCAP17252 672 aa16.47■□□□□ 0.23
VIM-201ENST00000224237 HK1P19367 917 aa16.47■□□□□ 0.23
VIM-201ENST00000224237 CCNA2P20248 432 aa16.47■□□□□ 0.23
VIM-201ENST00000224237 DLX5P56178 289 aa16.47■□□□□ 0.23
VIM-201ENST00000224237 RNLSQ5VYX0 342 aa16.47■□□□□ 0.23
VIM-201ENST00000224237 C5orf46Q6UWT4 87 aa16.47■□□□□ 0.23
VIM-201ENST00000224237 IL20RBQ6UXL0 311 aa16.47■□□□□ 0.23
VIM-201ENST00000224237 DPY19L2P2Q6ZN68 376 aa16.47■□□□□ 0.23
VIM-201ENST00000224237 RAB43Q86YS6 212 aa16.47■□□□□ 0.23
VIM-201ENST00000224237 CPOQ8IVL8 374 aa16.47■□□□□ 0.23
VIM-201ENST00000224237 RAB2BQ8WUD1 216 aa16.47■□□□□ 0.23
VIM-201ENST00000224237 C12orf43Q96C57 262 aaKnown RBP16.47■□□□□ 0.23
VIM-201ENST00000224237 RNFT2Q96EX2 444 aa16.47■□□□□ 0.23
VIM-201ENST00000224237 MOGAT1Q96PD6 335 aa16.47■□□□□ 0.23
VIM-201ENST00000224237 GPX7Q96SL4 187 aaPredicted RBP16.47■□□□□ 0.23
VIM-201ENST00000224237 FKRPQ9H9S5 495 aa16.47■□□□□ 0.23
VIM-201ENST00000224237 TIMMDC1Q9NPL8 285 aa16.47■□□□□ 0.23
VIM-201ENST00000224237 DIMT1Q9UNQ2 313 aaKnown RBP16.47■□□□□ 0.23
VIM-201ENST00000224237 TRAV36DV7A0A075B6V5 113 aa16.46■□□□□ 0.23
VIM-201ENST00000224237 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.46■□□□□ 0.23
VIM-201ENST00000224237 A8MVM7 634 aa16.46■□□□□ 0.23
VIM-201ENST00000224237 B4DXG7 233 aa16.46■□□□□ 0.23
VIM-201ENST00000224237 RAB36O95755 333 aa16.46■□□□□ 0.23
VIM-201ENST00000224237 HTR1FP30939 366 aa16.46■□□□□ 0.23
VIM-201ENST00000224237 RPS5P46782 204 aaKnown RBP16.46■□□□□ 0.23
VIM-201ENST00000224237 IL10RAQ13651 578 aa16.46■□□□□ 0.23
VIM-201ENST00000224237 FCRLBQ6BAA4 426 aa16.46■□□□□ 0.23
VIM-201ENST00000224237 ADGRG3Q86Y34 549 aa16.46■□□□□ 0.23
VIM-201ENST00000224237 TMEM156Q8N614 296 aa16.46■□□□□ 0.23
VIM-201ENST00000224237 OR52I1Q8NGK6 324 aa16.46■□□□□ 0.23
VIM-201ENST00000224237 LGALS12Q96DT0 336 aa16.46■□□□□ 0.23
VIM-201ENST00000224237 ERMAPQ96PL5 475 aaPredicted RBP16.46■□□□□ 0.23
VIM-201ENST00000224237 FUNDC2Q9BWH2 189 aa16.46■□□□□ 0.23
VIM-201ENST00000224237 TAPBPLQ9BX59 468 aa16.46■□□□□ 0.23
VIM-201ENST00000224237 CHRNA9Q9UGM1 479 aa16.46■□□□□ 0.23
VIM-201ENST00000224237 ERGIC3Q9Y282 383 aa16.46■□□□□ 0.23
VIM-201ENST00000224237 MRPS18BQ9Y676 258 aaKnown RBP16.46■□□□□ 0.23
VIM-201ENST00000224237 PCNX3Q9H6A9 2034 aa16.46■□□□□ 0.23
VIM-201ENST00000224237 LOC101059948A0A1B0GTJ6 334 aa16.46■□□□□ 0.22
VIM-201ENST00000224237 TMEM72A0PK05 275 aa16.46■□□□□ 0.22
VIM-201ENST00000224237 MCIDASD6RGH6 385 aa16.46■□□□□ 0.22
VIM-201ENST00000224237 MT-ATP6P00846 226 aa16.46■□□□□ 0.22
VIM-201ENST00000224237 PTHP01270 115 aa16.46■□□□□ 0.22
VIM-201ENST00000224237 ADRA2AP08913 450 aa16.46■□□□□ 0.22
VIM-201ENST00000224237 CSRP1P21291 193 aaKnown RBP16.46■□□□□ 0.22
VIM-201ENST00000224237 CD82P27701 267 aa16.46■□□□□ 0.22
VIM-201ENST00000224237 RPL4P36578 427 aaKnown RBP16.46■□□□□ 0.22
VIM-201ENST00000224237 APOBEC1P41238 236 aaKnown RBP16.46■□□□□ 0.22
VIM-201ENST00000224237 ZNF41P51814 821 aaPredicted RBP16.46■□□□□ 0.22
VIM-201ENST00000224237 GABREP78334 506 aa16.46■□□□□ 0.22
VIM-201ENST00000224237 PLBD1Q6P4A8 553 aa16.46■□□□□ 0.22
VIM-201ENST00000224237 ZNF367Q7RTV3 350 aa16.46■□□□□ 0.22
VIM-201ENST00000224237 STK35Q8TDR2 534 aa16.46■□□□□ 0.22
VIM-201ENST00000224237 TAAR8Q969N4 342 aa16.46■□□□□ 0.22
VIM-201ENST00000224237 NDEL1Q9GZM8 345 aa16.46■□□□□ 0.22
VIM-201ENST00000224237 NAA50Q9GZZ1 169 aaKnown RBP16.46■□□□□ 0.22
VIM-201ENST00000224237 WDR70Q9NW82 654 aa16.46■□□□□ 0.22
VIM-201ENST00000224237 HPF1Q9NWY4 346 aa16.46■□□□□ 0.22
VIM-201ENST00000224237 TAS2R16Q9NYV7 291 aa16.46■□□□□ 0.22
VIM-201ENST00000224237 FAM183AA6NL82 134 aa16.45■□□□□ 0.22
VIM-201ENST00000224237 PRR23D1E9PI22 279 aaPredicted RBP16.45■□□□□ 0.22
VIM-201ENST00000224237 H3BMQ9 156 aa16.45■□□□□ 0.22
VIM-201ENST00000224237 BLOC1S5-TXNDC5H3BN57 136 aa16.45■□□□□ 0.22
VIM-201ENST00000224237 ETV2O00321 342 aaPredicted RBP16.45■□□□□ 0.22
VIM-201ENST00000224237 NPIPB7O75200 414 aa16.45■□□□□ 0.22
VIM-201ENST00000224237 SERPINA7P05543 415 aa16.45■□□□□ 0.22
VIM-201ENST00000224237 PRR23D2P0DMB1 279 aaPredicted RBP16.45■□□□□ 0.22
VIM-201ENST00000224237 LTBQ06643 244 aa16.45■□□□□ 0.22
VIM-201ENST00000224237 Q0VFX4 171 aa16.45■□□□□ 0.22
VIM-201ENST00000224237 TIGD6Q17RP2 521 aa16.45■□□□□ 0.22
VIM-201ENST00000224237 FAM69AQ5T7M9 428 aa16.45■□□□□ 0.22
VIM-201ENST00000224237 NIPAL3Q6P499 406 aa16.45■□□□□ 0.22
VIM-201ENST00000224237 NANOGNBQ7Z5D8 188 aa16.45■□□□□ 0.22
VIM-201ENST00000224237 ANKRD13BQ86YJ7 626 aa16.45■□□□□ 0.22
VIM-201ENST00000224237 BBS1Q8NFJ9 593 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms