RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	RABIF	P47224	123 aa		15.33	■□□□□ 0.04
CACNA1A-238	ENST00000637276	VASP	P50552	380 aa	Predicted RBP	15.33	■□□□□ 0.04
CACNA1A-238	ENST00000637276	TUBA3C	Q13748	450 aa		15.33	■□□□□ 0.04
CACNA1A-238	ENST00000637276	DEFB109B	Q30KR1	87 aa		15.33	■□□□□ 0.04
CACNA1A-238	ENST00000637276	DCAF12	Q5T6F0	453 aa		15.33	■□□□□ 0.04
CACNA1A-238	ENST00000637276	THNSL2	Q86YJ6	484 aa		15.33	■□□□□ 0.04
CACNA1A-238	ENST00000637276	NIPA2	Q8N8Q9	360 aa		15.33	■□□□□ 0.04
CACNA1A-238	ENST00000637276	TXNRD2	Q9NNW7	524 aa		15.33	■□□□□ 0.04
CACNA1A-238	ENST00000637276	TREM2	Q9NZC2	230 aa		15.33	■□□□□ 0.04
CACNA1A-238	ENST00000637276	NSA2	O95478	260 aa	Known RBP	15.33	■□□□□ 0.04
CACNA1A-238	ENST00000637276	OR13C7	P0DN81	318 aa		15.33	■□□□□ 0.04
CACNA1A-238	ENST00000637276	UGT2B7	P16662	529 aa		15.33	■□□□□ 0.04
CACNA1A-238	ENST00000637276	ZNF92	Q03936	586 aa		15.33	■□□□□ 0.04
CACNA1A-238	ENST00000637276	ADIRF	Q15847	76 aa		15.33	■□□□□ 0.04
CACNA1A-238	ENST00000637276	PODNL1	Q6PEZ8	512 aa		15.33	■□□□□ 0.04
CACNA1A-238	ENST00000637276	ULBP2	Q9BZM5	246 aa		15.33	■□□□□ 0.04
CACNA1A-238	ENST00000637276	LMTK2	Q8IWU2	1503 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	MEIOC	A2RUB1	952 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	PITX1	P78337	314 aa	Predicted RBP	15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	VWA5B2	Q8N398	1253 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	SLC45A3	Q96JT2	553 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276		A0A0U1RQF3	1178 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	FOLR1	P15328	257 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	RAB35	Q15286	201 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	MKX	Q8IYA7	352 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	NXF2	Q9GZY0	626 aa	Known RBP	15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	RABL2A	Q9UBK7	228 aa	Predicted RBP	15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	KIF25	Q9UIL4	384 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	NXT1	Q9UKK6	140 aa	Known RBP	15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276		A0A1W2PQL4	384 aa	Predicted RBP	15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	HACD4	Q5VWC8	232 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	OR2M7	Q8NG81	312 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	OR5P2	Q8WZ92	322 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	DVL3	Q92997	716 aa	Predicted RBP	15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	PIGT	Q969N2	578 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	OR8B4	Q96RC9	309 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	AUP1	Q9Y679	476 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	NKX6-3	A6NJ46	265 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	ACOD1	A6NK06	481 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	ZNF736	B4DX44	427 aa	Predicted RBP	15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	PRAMEF11	O60813	436 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	SNCG	O76070	127 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	BCKDHB	P21953	392 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	DAP3	P51398	398 aa	Known RBP	15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	TMEM184A	Q6ZMB5	413 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	VRK2	Q86Y07	508 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	APIP	Q96GX9	242 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	GPR62	Q9BZJ7	368 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	OR2M5	A3KFT3	312 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	P2RY10	O00398	339 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	FAAH	O00519	579 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	GATC	O43716	136 aa	Known RBP	15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	FAM157B	P0CG42	384 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	TCN2	P20062	427 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	PRDX3	P30048	256 aa	Known RBP	15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	MTCP1	P56278	107 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276		Q6ZPB1	254 aa	Predicted RBP	15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	OR52B6	Q8NGF0	335 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276	SLC29A1	Q99808	456 aa		15.32	■□□□□ 0.04
CACNA1A-238	ENST00000637276		A0A1W2PR64	198 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	FUT1	P19526	365 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	SLC35F3	Q8IY50	421 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	NETO1	Q8TDF5	533 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	POTEKP	Q9BYX7	375 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	LIN7C	Q9NUP9	197 aa	Known RBP	15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276		A0A1W2PS29	197 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	ANKRD61	A6NGH8	418 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276		J3KTA2	159 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	CYP1B1	Q16678	543 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	ABHD11	Q8NFV4	315 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	SLC6A5	Q9Y345	797 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	GJB3	O75712	270 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	BCAS2	O75934	225 aa	Predicted RBP	15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	FGF3	P11487	239 aa	Predicted RBP	15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	HOXD8	P13378	290 aa	Predicted RBP	15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	OR8G1	Q15617	311 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	CMAS	Q8NFW8	434 aa	Predicted RBP	15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	TMEM19	Q96HH6	336 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	RSRP1	Q9BUV0	290 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	KIAA1456	Q9P272	454 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	C4orf47	A7E2U8	309 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	MSTN	O14793	375 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	OR5G3	P0C626	314 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	CNN3	Q15417	329 aa	Known RBP	15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	METAP1D	Q6UB28	335 aa	Predicted RBP	15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	FAM198B	Q6UWH4	519 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	ZC3H3	Q8IXZ2	948 aa	Known RBP	15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	OR51D1	Q8NGF3	324 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	NFS1	Q9Y697	457 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	MYH2	Q9UKX2	1941 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	RASAL1	O95294	804 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	HAPLN1	P10915	354 aa	Predicted RBP	15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	TAGLN	Q01995	201 aa	Known RBP	15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	C6orf136	Q5SQH8	315 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	SLC35G3	Q8N808	338 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	SELENOI	Q9C0D9	397 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	CDCP1	Q9H5V8	836 aa		15.31	■□□□□ 0.04
CACNA1A-238	ENST00000637276	GAB2	Q9UQC2	676 aa		15.31	■□□□□ 0.04

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms