RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 SERHL2Q9H4I8 314 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 CTPS2Q9NRF8 586 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 NPAP1Q9NZP6 1156 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 SLC9A8Q9Y2E8 581 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 AMDHD2Q9Y303 409 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 PLCE1Q9P212 2302 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 NBEAL1Q6ZS30 2694 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 FAM234BA2RU67 622 aa15.67■□□□□ 0.1
SHKBP1-227ENST00000602011 FAAHO00519 579 aa15.67■□□□□ 0.1
SHKBP1-227ENST00000602011 SPAG7O75391 227 aa15.67■□□□□ 0.1
SHKBP1-227ENST00000602011 RAD51DO75771 328 aa15.67■□□□□ 0.1
SHKBP1-227ENST00000602011 OR12D1P0DN82 309 aa15.67■□□□□ 0.1
SHKBP1-227ENST00000602011 KHKP50053 298 aa15.67■□□□□ 0.1
SHKBP1-227ENST00000602011 VLDLRP98155 873 aa15.67■□□□□ 0.1
SHKBP1-227ENST00000602011 GSTA3Q16772 222 aa15.67■□□□□ 0.1
SHKBP1-227ENST00000602011 CLECL1Q8IZS7 167 aa15.67■□□□□ 0.1
SHKBP1-227ENST00000602011 TRIML2Q8N7C3 387 aa15.67■□□□□ 0.1
SHKBP1-227ENST00000602011 OR52N5Q8NH56 324 aa15.67■□□□□ 0.1
SHKBP1-227ENST00000602011 NEURL3Q96EH8 262 aa15.67■□□□□ 0.1
SHKBP1-227ENST00000602011 BOD1Q96IK1 185 aa15.67■□□□□ 0.1
SHKBP1-227ENST00000602011 AMBRA1Q9C0C7 1298 aa15.67■□□□□ 0.1
SHKBP1-227ENST00000602011 MTHFD2LQ9H903 347 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-227ENST00000602011 UPB1Q9UBR1 384 aa15.67■□□□□ 0.1
SHKBP1-227ENST00000602011 BIRC5O15392 142 aa15.66■□□□□ 0.1
SHKBP1-227ENST00000602011 SCN2BO60939 215 aa15.66■□□□□ 0.1
SHKBP1-227ENST00000602011 WNT11O96014 354 aa15.66■□□□□ 0.1
SHKBP1-227ENST00000602011 EDNRAP25101 427 aa15.66■□□□□ 0.1
SHKBP1-227ENST00000602011 APOBEC3AP31941 199 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-227ENST00000602011 OR2B6P58173 313 aa15.66■□□□□ 0.1
SHKBP1-227ENST00000602011 IRX1P78414 480 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-227ENST00000602011 CHRNEQ04844 493 aa15.66■□□□□ 0.1
SHKBP1-227ENST00000602011 MAPK14Q16539 360 aa15.66■□□□□ 0.1
SHKBP1-227ENST00000602011 TMEM249Q2WGJ8 235 aa15.66■□□□□ 0.1
SHKBP1-227ENST00000602011 SAXO2Q658L1 398 aa15.66■□□□□ 0.1
SHKBP1-227ENST00000602011 EMBQ6PCB8 327 aa15.66■□□□□ 0.1
SHKBP1-227ENST00000602011 ABHD12BQ7Z5M8 362 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-227ENST00000602011 ARL5BQ96KC2 179 aa15.66■□□□□ 0.1
SHKBP1-227ENST00000602011 TRNT1Q96Q11 434 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-227ENST00000602011 SF3B5Q9BWJ5 86 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-227ENST00000602011 AKTIPQ9H8T0 292 aa15.66■□□□□ 0.1
SHKBP1-227ENST00000602011 MOV10Q9HCE1 1003 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-227ENST00000602011 OBP2BQ9NPH6 170 aa15.66■□□□□ 0.1
SHKBP1-227ENST00000602011 FBXO9Q9UK97 447 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-227ENST00000602011 IGHV4-30-2A0A087WSY4 118 aa15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 PDLIM1O00151 329 aa15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 TYROBPO43914 113 aa15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 ARRB2P32121 409 aa15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 RYKP34925 604 aa15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 CHI3L1P36222 383 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 SLC1A3P43003 542 aa15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 ETV4P43268 484 aa15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 IDH2P48735 452 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 ZNF83P51522 516 aa15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 POLR2HP52434 150 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 EFNA4P52798 201 aa15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 PRPS1P60891 318 aa15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 CASP8Q14790 479 aa15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 ZSWIM7Q19AV6 140 aa15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 GPAT3Q53EU6 434 aa15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 C6orf52Q5T4I8 152 aa15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 CYB5R2Q6BCY4 276 aa15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 PAQR6Q6TCH4 344 aa15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 FRRS1Q6ZNA5 592 aa15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 ZNF440Q8IYI8 595 aa15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 FAM168AQ92567 244 aa15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 MARCOQ9UEW3 520 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 BTNL2Q9UIR0 455 aa15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 RAP2CQ9Y3L5 183 aa15.65■□□□□ 0.1
SHKBP1-227ENST00000602011 TMED7-TICAM2A0A0A6YYA0 188 aa15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 OR6C65A6NJZ3 312 aa15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 M0R1B8 84 aa15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 NDUFS8O00217 210 aa15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 GPRIN2O60269 458 aa15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 CPSF4O95639 269 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 F12P00748 615 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 IGHV3-9P01782 118 aa15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 SERPINE1P05121 402 aa15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 PTNP21246 168 aa15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 MPGP29372 298 aa15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 RPL14P50914 215 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 CASP9P55211 416 aa15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 TNFAIP8L2Q6P589 184 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 LRRC74BQ6ZQY2 392 aa15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 POMGNT2Q8NAT1 580 aa15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 TMEM45BQ96B21 275 aa15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 ZNF317Q96PQ6 595 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 KCNK17Q96T54 332 aa15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 TMEM109Q9BVC6 243 aa15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 BEX2Q9BXY8 128 aa15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 SLC17A5Q9NRA2 495 aa15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 TMED7Q9Y3B3 224 aa15.64■□□□□ 0.09
SHKBP1-227ENST00000602011 A0A096LNT2 108 aa15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 CENPVL1A0A0U1RR11 272 aa15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 AGAP5A6NIR3 686 aa15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 ZNF500O60304 480 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 VAMP5O95183 116 aa15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 ITGA5P08648 1049 aa15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 LBPP18428 481 aa15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 S100A3P33764 101 aa15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 ABCE1P61221 599 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms