RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	TLX1	P31314	330 aa	Predicted RBP	10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	PYCR1	P32322	319 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	CSF2RB	P32927	897 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	GPR1	P46091	355 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	PTH2R	P49190	550 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	SRP9	P49458	86 aa	Known RBP	10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	DIO1	P49895	249 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	RAB28	P51157	221 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	SLC25A1	P53007	311 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	ST8SIA6	P61647	398 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	PPP2CB	P62714	309 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	PPP2CA	P67775	309 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	CSNK1G2	P78368	415 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	CYCS	P99999	105 aa	Known RBP	10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	MAT1A	Q00266	395 aa	Known RBP	10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	ZNF85	Q03923	595 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	SLC3A1	Q07837	685 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	ETFDH	Q16134	617 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	PAN3	Q58A45	887 aa	Known RBP	10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	PIP5KL1	Q5T9C9	394 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	PWWP2B	Q6NUJ5	590 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	MFSD12	Q6NUT3	480 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	ABHD17C	Q6PCB6	329 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	TSSK4	Q6SA08	328 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	ERN2	Q76MJ5	926 aa	Known RBP	10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	SLC36A1	Q7Z2H8	476 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	LRRTM4	Q86VH4	590 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	OR2L13	Q8N349	312 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	OR2L8	Q8NGY9	312 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	LGALS14	Q8TCE9	139 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	ZDHHC1	Q8WTX9	485 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	POF1B	Q8WVV4	589 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	CDS1	Q92903	461 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	FBXW5	Q969U6	566 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	PTX4	Q96A99	478 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	BPIFA2	Q96DR5	249 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	COX14	Q96I36	57 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	NPAS1	Q99742	590 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	ZNF426	Q9BUY5	554 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	EDEM2	Q9BV94	578 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	LGR4	Q9BXB1	951 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	RSPO3	Q9BXY4	272 aa	Predicted RBP	10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	MFF	Q9GZY8	342 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	SLC6A20	Q9NP91	592 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	CD84	Q9UIB8	345 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	COPS3	Q9UNS2	423 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	FOXJ3	Q9UPW0	622 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	HEBP2	Q9Y5Z4	205 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	TMEM14A	Q9Y6G1	99 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	CCDC88C	Q9P219	2028 aa		10.85	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	TRBV2	A0A0J9YWF9	115 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	RNF222	A6NCQ9	220 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236		A8MX80	341 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	TGM5	O43548	720 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	SCO1	O75880	301 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	ATG12	O94817	140 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	GLS	O94925	669 aa	Predicted RBP	10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	NDUFB2	O95178	105 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	PAK4	O96013	591 aa	Predicted RBP	10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	CHRM5	P08912	532 aa	Predicted RBP	10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	ANKRD34C	P0C6C1	535 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	ICAM2	P13598	275 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	ATP5A1	P25705	553 aa	Known RBP	10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	NDUFS1	P28331	727 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	CD79B	P40259	229 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	STAR	P49675	285 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	GATM	P50440	423 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	PRPS1	P60891	318 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	UBE2M	P61081	183 aa	Known RBP	10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	MEF2D	Q14814	521 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	HMGN3	Q15651	99 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	PNLIPRP3	Q17RR3	467 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	SLC25A35	Q3KQZ1	300 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236		Q499Y3	187 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	EMC4	Q5J8M3	183 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	C10orf91	Q5T1B1	145 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	ZNF660	Q6AZW8	331 aa	Predicted RBP	10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	AWAT2	Q6E213	333 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	EIF5AL1	Q6IS14	154 aa	Known RBP	10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	ENPP7	Q6UWV6	458 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	DLK2	Q6UY11	383 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	IL34	Q6ZMJ4	242 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	DPY19L2P2	Q6ZN68	376 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	FRRS1	Q6ZNA5	592 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	CFAP77	Q6ZQR2	320 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	RFLNA	Q6ZTI6	216 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236		Q6ZVU0	165 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	ZNF550	Q7Z398	422 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	FAM220A	Q7Z4H9	259 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	UBE3D	Q7Z6J8	389 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	ZNF227	Q86WZ6	799 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	ZNF440	Q8IYI8	595 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	LRRC25	Q8N386	305 aa	Predicted RBP	10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	TMEM99	Q8N816	258 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	CDRT4	Q8N9R6	151 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	OR52I2	Q8NH67	350 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	STOML3	Q8TAV4	291 aa		10.84	□□□□□ -0.67
U2AF1L4-221	ENST00000601236	SNX33	Q8WV41	574 aa		10.84	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 75 ms