RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 HTRA1Q92743 480 aa13.95□□□□□ -0.18
GTF2F1-203ENST00000594213 ZHX1-C8orf76Q96EF9 292 aa13.95□□□□□ -0.18
GTF2F1-203ENST00000594213 NEURL3Q96EH8 262 aa13.95□□□□□ -0.18
GTF2F1-203ENST00000594213 ITM2AO43736 263 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 C1QCP02747 245 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 IMPDH2P12268 514 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 SLC25A16P16260 332 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 SLC25A3Q00325 362 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 CASP8Q14790 479 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 SLC17A1Q14916 467 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 RAB35Q15286 201 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 ATAD3BQ5T9A4 648 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.94□□□□□ -0.182e-6■■■□□ 18.9
GTF2F1-203ENST00000594213 ANKRD46Q86W74 232 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 LSRQ86X29 649 aaPredicted RBP13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 ZNF525Q8N782 197 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 ZNF563Q8TA94 476 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 C10orf105Q8TEF2 133 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 CNOT9Q92600 299 aaKnown RBP13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 TESCQ96BS2 214 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 DNAJA3Q96EY1 480 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 INPP5KQ9BT40 448 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 C1QTNF6Q9BXI9 259 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 SLC17A5Q9NRA2 495 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 SLC7A10Q9NS82 523 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 TMEM181Q9P2C4 612 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 DCTN4Q9UJW0 460 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 OSGIN1Q9UJX0 560 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 CDC42EP3Q9UKI2 254 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 POU2F3Q9UKI9 436 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 PCDHGB4Q9UN71 923 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 FLVCR1Q9Y5Y0 555 aa13.94□□□□□ -0.18
GTF2F1-203ENST00000594213 M0R1B8 84 aa13.93□□□□□ -0.18
GTF2F1-203ENST00000594213 ZNF208O43345 1280 aa13.93□□□□□ -0.18
GTF2F1-203ENST00000594213 MAGEA8P43361 318 aa13.93□□□□□ -0.18
GTF2F1-203ENST00000594213 IDH2P48735 452 aaKnown RBP13.93□□□□□ -0.18
GTF2F1-203ENST00000594213 OR2B6P58173 313 aa13.93□□□□□ -0.18
GTF2F1-203ENST00000594213 MST1LQ2TV78 715 aa13.93□□□□□ -0.18
GTF2F1-203ENST00000594213 C1QTNF12Q5T7M4 302 aa13.93□□□□□ -0.18
GTF2F1-203ENST00000594213 ANXA8L1Q5VT79 327 aa13.93□□□□□ -0.18
GTF2F1-203ENST00000594213 HMGN2P46Q86SG4 172 aa13.93□□□□□ -0.18
GTF2F1-203ENST00000594213 C17orf78Q8N4C9 275 aa13.93□□□□□ -0.18
GTF2F1-203ENST00000594213 ARFGAP2Q8N6H7 521 aa13.93□□□□□ -0.18
GTF2F1-203ENST00000594213 ZIC4Q8N9L1 334 aa13.93□□□□□ -0.18
GTF2F1-203ENST00000594213 C1orf162Q8NEQ5 155 aaPredicted RBP13.93□□□□□ -0.18
GTF2F1-203ENST00000594213 BOD1Q96IK1 185 aa13.93□□□□□ -0.18
GTF2F1-203ENST00000594213 ROPN1BQ9BZX4 212 aaPredicted RBP13.93□□□□□ -0.18
GTF2F1-203ENST00000594213 ROPN1Q9HAT0 212 aaPredicted RBP13.93□□□□□ -0.18
GTF2F1-203ENST00000594213 TMED7-TICAM2A0A0A6YYA0 188 aa13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 TMEM72A0PK05 275 aa13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 HMGN4O00479 90 aa13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 FAAHO00519 579 aa13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 AP3D1O14617 1153 aa13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 PHF1O43189 567 aaPredicted RBP13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 EIF1BO60739 113 aaKnown RBP13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 CPSF4O95639 269 aaKnown RBP13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 IGHV4-31P0DP07 118 aa13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 HTR3AP46098 478 aa13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 EFNA4P52798 201 aa13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 SWI5Q1ZZU3 235 aa13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 TSPO2Q5TGU0 170 aa13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 CMIPQ8IY22 773 aa13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 DEPDC4Q8N2C3 294 aa13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 ZNF781Q8N8C0 355 aa13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 FAM168AQ92567 244 aa13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 PROX1Q92786 737 aa13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 PMM1Q92871 262 aa13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 TRNT1Q96Q11 434 aaKnown RBP13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 DPY30Q9C005 99 aa13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 C20orf27Q9GZN8 174 aa13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 SLC38A1Q9H2H9 487 aa13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 PARPBPQ9NWS1 579 aa13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 TMED7Q9Y3B3 224 aa13.92□□□□□ -0.18
GTF2F1-203ENST00000594213 ZC3H12DA2A288 527 aaKnown RBP13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 AGAP5A6NIR3 686 aa13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 VWC2LB2RUY7 222 aa13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 CCNA2P20248 432 aa13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 RPS4Y1P22090 263 aaKnown RBP13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 APOBEC3AP31941 199 aaPredicted RBP13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 KHKP50053 298 aa13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 POLR2HP52434 150 aaKnown RBP13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 MAP2K6P52564 334 aa13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 SLC35A1P78382 337 aa13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 PDCD2Q16342 344 aaPredicted RBP13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 SPANXN4Q5MJ08 99 aa13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 C9orf135Q5VTT2 229 aa13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 CYB5R2Q6BCY4 276 aa13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 CASP12Q6UXS9 341 aa13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 NUDCD3Q8IVD9 361 aa13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 ANKFN1Q8N957 763 aa13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 TMEM45BQ96B21 275 aa13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 PPP1R36Q96LQ0 422 aa13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 CCDC115Q96NT0 180 aa13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 KCNK17Q96T54 332 aa13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 ADAM19Q9H013 955 aa13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 MANSC1Q9H8J5 431 aa13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 FKRPQ9H9S5 495 aa13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 MARCOQ9UEW3 520 aaPredicted RBP13.91□□□□□ -0.18
GTF2F1-203ENST00000594213 HAO1Q9UJM8 370 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms