RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 TMEM181Q9P2C4 612 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 P2RX2Q9UBL9 471 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 MALT1Q9UDY8 824 aa6.73□□□□□ -1.33
NPC1-208ENST00000590301 PRRC2AP48634 2157 aaKnown RBP6.72□□□□□ -1.33
NPC1-208ENST00000590301 KIAA1549Q9HCM3 1950 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 GOLGA8QA0A0J9YX86 632 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 GOLGA8OA6NCC3 632 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 TMEM247A6NEH6 219 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 OR5H1A6NKK0 313 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 ZNF716A6NP11 495 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 GOLGA8NF8WBI6 632 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 H7C1Q1 480 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 OVOL3O00110 214 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 CLOCKO15516 846 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 PGM3O95394 542 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 NR2F1P10589 423 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 IL7RP16871 459 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 RPS4Y1P22090 263 aaKnown RBP6.72□□□□□ -1.33
NPC1-208ENST00000590301 RYKP34925 604 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 IDH2P48735 452 aaKnown RBP6.72□□□□□ -1.33
NPC1-208ENST00000590301 CRISP3P54108 245 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 CASP9P55211 416 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 ATP5J2P56134 94 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 WDR4P57081 412 aaKnown RBP6.72□□□□□ -1.33
NPC1-208ENST00000590301 H3F3AP84243 136 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 TGFBR3Q03167 851 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 PPA1Q15181 289 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 ZNF672Q499Z4 452 aaPredicted RBP6.72□□□□□ -1.33
NPC1-208ENST00000590301 LIN52Q52LA3 116 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 NXNQ6DKJ4 435 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 OR7E24Q6IFN5 339 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 KLHL17Q6TDP4 642 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 TMEM108Q6UXF1 575 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 ADGRG3Q86Y34 549 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 ALDH16A1Q8IZ83 802 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 ZNF433Q8N7K0 673 aaPredicted RBP6.72□□□□□ -1.33
NPC1-208ENST00000590301 ANKFN1Q8N957 763 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 SMAP2Q8WU79 429 aaPredicted RBP6.72□□□□□ -1.33
NPC1-208ENST00000590301 CNOT9Q92600 299 aaKnown RBP6.72□□□□□ -1.33
NPC1-208ENST00000590301 SLC35B4Q969S0 331 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 ZG16BQ96DA0 208 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 ITCHQ96J02 903 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 ZNF300Q96RE9 604 aaPredicted RBP6.72□□□□□ -1.33
NPC1-208ENST00000590301 RAD21L1Q9H4I0 556 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 WDR55Q9H6Y2 383 aaPredicted RBP6.72□□□□□ -1.33
NPC1-208ENST00000590301 MANSC1Q9H8J5 431 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 BARX1Q9HBU1 254 aaPredicted RBP6.72□□□□□ -1.33
NPC1-208ENST00000590301 ASB6Q9NWX5 421 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 TAS2R16Q9NYV7 291 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 MGAT4BQ9UQ53 548 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 SLC9A8Q9Y2E8 581 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 NOSIPQ9Y314 301 aaKnown RBP6.72□□□□□ -1.33
NPC1-208ENST00000590301 DSPPQ9NZW4 1301 aa6.72□□□□□ -1.33
NPC1-208ENST00000590301 MED12Q93074 2177 aa6.71□□□□□ -1.33
NPC1-208ENST00000590301 A0A096LPI6 279 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 TMED7-TICAM2A0A0A6YYA0 188 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 A0A0G2JPF8 293 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 A0A1W2PP18 115 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 FAM234BA2RU67 622 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 PRAMEF27A3QJZ7 478 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 CDHR4A6H8M9 788 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 HNRNPCL2B2RXH8 293 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 HNRNPCL3B7ZW38 293 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 UBDO15205 165 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 HNRNPCL1O60812 293 aaKnown RBP6.71□□□□□ -1.34
NPC1-208ENST00000590301 MRPL33O75394 65 aaKnown RBP6.71□□□□□ -1.34
NPC1-208ENST00000590301 LYZL6O75951 148 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 TGDSO95455 350 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 PLAUP00749 431 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 THBS1P07996 1170 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 CHRM4P08173 479 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 DANCRP0C864 163 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 HNRNPCL4P0DMR1 293 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 IGHV1-2P23083 117 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 PAX7P23759 505 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 PTAFRP25105 342 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 TACR3P29371 465 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 IL12AP29459 219 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 IDUAP35475 653 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 CDKN2CP42773 168 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 MRPL19P49406 292 aaKnown RBP6.71□□□□□ -1.34
NPC1-208ENST00000590301 NME5P56597 212 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 OR2B6P58173 313 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 MAGOHP61326 146 aaKnown RBP6.71□□□□□ -1.34
NPC1-208ENST00000590301 COPZ1P61923 177 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 IRX1P78414 480 aaPredicted RBP6.71□□□□□ -1.34
NPC1-208ENST00000590301 PLAURQ03405 335 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 BSPH1Q075Z2 132 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 EPS8Q12929 822 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 LARS2Q15031 903 aaKnown RBP6.71□□□□□ -1.34
NPC1-208ENST00000590301 TSC22D1Q15714 1073 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 STK11Q15831 433 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 SYPL1Q16563 259 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 MRPL2Q5T653 305 aaKnown RBP6.71□□□□□ -1.34
NPC1-208ENST00000590301 RNF220Q5VTB9 566 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 PRAMEF8Q5VWM4 474 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 PRAMEF7Q5VXH5 474 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 PAQR6Q6TCH4 344 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 SEZ6L2Q6UXD5 910 aa6.71□□□□□ -1.34
NPC1-208ENST00000590301 OLIG3Q7RTU3 272 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms