RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 PGM1P36871 562 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 GZMKP49863 264 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 PDLIM4P50479 330 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 SLC16A1P53985 500 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 FOXG1P55316 489 aaPredicted RBP13.29□□□□□ -0.28
HDAC5-206ENST00000587776 PHC1P78364 1004 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 LSM11P83369 360 aaKnown RBP eCLIP13.29□□□□□ -0.28
HDAC5-206ENST00000587776 TGFBR3Q03167 851 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 GGTLC2Q14390 218 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 MAPK14Q16539 360 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 CARTPTQ16568 116 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 KRTAP24-1Q3LI83 254 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 GPAT3Q53EU6 434 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 FAM166AQ6J272 317 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 TNFAIP8L2Q6P589 184 aaPredicted RBP13.29□□□□□ -0.28
HDAC5-206ENST00000587776 HMGN2P46Q86SG4 172 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 C17orf78Q8N4C9 275 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 AENQ8WTP8 325 aaKnown RBP13.29□□□□□ -0.28
HDAC5-206ENST00000587776 DDIT4LQ96D03 193 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 MUS81Q96NY9 551 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 PIMREGQ9BSJ6 248 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 NAA11Q9BSU3 229 aaPredicted RBP13.29□□□□□ -0.28
HDAC5-206ENST00000587776 SLC17A5Q9NRA2 495 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 POLE3Q9NRF9 147 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 PARPBPQ9NWS1 579 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 TMEM181Q9P2C4 612 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 ZDHHC2Q9UIJ5 367 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 DCTN4Q9UJW0 460 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 SLC9A8Q9Y2E8 581 aa13.29□□□□□ -0.28
HDAC5-206ENST00000587776 ATP6V1G2-DDX39BF2Z307 99 aa13.28□□□□□ -0.28
HDAC5-206ENST00000587776 RNASET2O00584 256 aaKnown RBP13.28□□□□□ -0.28
HDAC5-206ENST00000587776 BCAS1O75363 584 aaPredicted RBP13.28□□□□□ -0.28
HDAC5-206ENST00000587776 SPAG7O75391 227 aa13.28□□□□□ -0.28
HDAC5-206ENST00000587776 CPSF4O95639 269 aaKnown RBP13.28□□□□□ -0.28
HDAC5-206ENST00000587776 WNT11O96014 354 aa13.28□□□□□ -0.28
HDAC5-206ENST00000587776 C8BP07358 591 aa13.28□□□□□ -0.28
HDAC5-206ENST00000587776 CDH2P19022 906 aaPredicted RBP13.28□□□□□ -0.28
HDAC5-206ENST00000587776 HNF1AP20823 631 aa13.28□□□□□ -0.28
HDAC5-206ENST00000587776 NTF4P34130 210 aa13.28□□□□□ -0.28
HDAC5-206ENST00000587776 CHI3L1P36222 383 aaPredicted RBP13.28□□□□□ -0.28
HDAC5-206ENST00000587776 SERPINB5P36952 375 aa13.28□□□□□ -0.28
HDAC5-206ENST00000587776 IDH2P48735 452 aaKnown RBP13.28□□□□□ -0.28
HDAC5-206ENST00000587776 CLK1P49759 484 aaKnown RBP13.28□□□□□ -0.28
HDAC5-206ENST00000587776 KHKP50053 298 aa13.28□□□□□ -0.28
HDAC5-206ENST00000587776 CLDN8P56748 225 aa13.28□□□□□ -0.28
HDAC5-206ENST00000587776 SLC35A1P78382 337 aa13.28□□□□□ -0.28
HDAC5-206ENST00000587776 TYW3Q6IPR3 259 aaKnown RBP13.28□□□□□ -0.28
HDAC5-206ENST00000587776 IL17RELQ6ZVW7 336 aa13.28□□□□□ -0.28
HDAC5-206ENST00000587776 ANKRD46Q86W74 232 aa13.28□□□□□ -0.28
HDAC5-206ENST00000587776 ARIH2OSQ8N7S6 290 aa13.28□□□□□ -0.28
HDAC5-206ENST00000587776 WDR31Q8NA23 367 aa13.28□□□□□ -0.28
HDAC5-206ENST00000587776 FAM71CQ8NEG0 241 aa13.28□□□□□ -0.28
HDAC5-206ENST00000587776 C1orf162Q8NEQ5 155 aaPredicted RBP13.28□□□□□ -0.28
HDAC5-206ENST00000587776 OIT3Q8WWZ8 545 aa13.28□□□□□ -0.28
HDAC5-206ENST00000587776 RAB8BQ92930 207 aa13.28□□□□□ -0.28
HDAC5-206ENST00000587776 C3orf49Q96BT1 292 aa13.28□□□□□ -0.28
HDAC5-206ENST00000587776 ROPN1LQ96C74 230 aa13.28□□□□□ -0.28
HDAC5-206ENST00000587776 FBXO17Q96EF6 278 aa13.28□□□□□ -0.28
HDAC5-206ENST00000587776 PPP1R36Q96LQ0 422 aa13.28□□□□□ -0.28
HDAC5-206ENST00000587776 KCNS3Q9BQ31 491 aa13.28□□□□□ -0.28
HDAC5-206ENST00000587776 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.28□□□□□ -0.28
HDAC5-206ENST00000587776 TMED7-TICAM2A0A0A6YYA0 188 aa13.27□□□□□ -0.29
HDAC5-206ENST00000587776 LOC100289279A0A1B0GTE1 492 aa13.27□□□□□ -0.29
HDAC5-206ENST00000587776 EIF1BO60739 113 aaKnown RBP13.27□□□□□ -0.29
HDAC5-206ENST00000587776 NUDT17P0C025 328 aa13.27□□□□□ -0.29
HDAC5-206ENST00000587776 UQCRC2P22695 453 aa13.27□□□□□ -0.29
HDAC5-206ENST00000587776 IGFBP5P24593 272 aa13.27□□□□□ -0.29
HDAC5-206ENST00000587776 HTR3AP46098 478 aa13.27□□□□□ -0.29
HDAC5-206ENST00000587776 PRPS1P60891 318 aa13.27□□□□□ -0.29
HDAC5-206ENST00000587776 SNRPD2P62316 118 aaKnown RBP13.27□□□□□ -0.29
HDAC5-206ENST00000587776 KCNJ10P78508 379 aa13.27□□□□□ -0.29
HDAC5-206ENST00000587776 WDR93Q6P2C0 686 aa13.27□□□□□ -0.29
HDAC5-206ENST00000587776 EMBQ6PCB8 327 aa13.27□□□□□ -0.29
HDAC5-206ENST00000587776 FRRS1Q6ZNA5 592 aa13.27□□□□□ -0.29
HDAC5-206ENST00000587776 ADGRG3Q86Y34 549 aa13.27□□□□□ -0.29
HDAC5-206ENST00000587776 VPS37AQ8NEZ2 397 aa13.27□□□□□ -0.29
HDAC5-206ENST00000587776 MIPOL1Q8TD10 442 aa13.27□□□□□ -0.29
HDAC5-206ENST00000587776 TCP10LQ8TDR4 215 aa13.27□□□□□ -0.29
HDAC5-206ENST00000587776 C19orf24Q9BVV8 132 aa13.27□□□□□ -0.29
HDAC5-206ENST00000587776 DPY30Q9C005 99 aa13.27□□□□□ -0.29
HDAC5-206ENST00000587776 EXOSC3Q9NQT5 275 aaKnown RBP13.27□□□□□ -0.29
HDAC5-206ENST00000587776 SLC7A10Q9NS82 523 aa13.27□□□□□ -0.29
HDAC5-206ENST00000587776 MOKQ9UQ07 419 aa13.27□□□□□ -0.29
HDAC5-206ENST00000587776 TRAPPC4Q9Y296 219 aa13.27□□□□□ -0.29
HDAC5-206ENST00000587776 TMED7Q9Y3B3 224 aa13.27□□□□□ -0.29
HDAC5-206ENST00000587776 FLVCR1Q9Y5Y0 555 aa13.27□□□□□ -0.29
HDAC5-206ENST00000587776 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.27□□□□□ -0.292e-6■□□□□ 10.3
HDAC5-206ENST00000587776 KRT33AO76009 404 aa13.26□□□□□ -0.29
HDAC5-206ENST00000587776 APEHP13798 732 aaKnown RBP13.26□□□□□ -0.29
HDAC5-206ENST00000587776 POLR2HP52434 150 aaKnown RBP13.26□□□□□ -0.29
HDAC5-206ENST00000587776 SLC25A3Q00325 362 aa13.26□□□□□ -0.29
HDAC5-206ENST00000587776 SRSF2Q01130 221 aaKnown RBP13.26□□□□□ -0.29
HDAC5-206ENST00000587776 EMX2Q04743 252 aa13.26□□□□□ -0.29
HDAC5-206ENST00000587776 PDCD2Q16342 344 aaPredicted RBP13.26□□□□□ -0.29
HDAC5-206ENST00000587776 IQCCQ4KMZ1 466 aa13.26□□□□□ -0.29
HDAC5-206ENST00000587776 TSPO2Q5TGU0 170 aa13.26□□□□□ -0.29
HDAC5-206ENST00000587776 SLC46A3Q7Z3Q1 461 aa13.26□□□□□ -0.29
HDAC5-206ENST00000587776 RIBC1Q8N443 379 aaPredicted RBP13.26□□□□□ -0.29
HDAC5-206ENST00000587776 PMM1Q92871 262 aa13.26□□□□□ -0.29
HDAC5-206ENST00000587776 VRK1Q99986 396 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms