RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 PCNX2A6NKB5 2137 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 D6RAR5 112 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 PRAMEF26H0Y7S4 382 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 K7ENP7 123 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 SAP18O00422 153 aaKnown RBP2.25□□□□□ -2.05
SCFD1-219ENST00000556413 PDXKO00764 312 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 AQP9O43315 295 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 CLN5O75503 358 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 YEATS4O95619 227 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 HSP90AA1P07900 732 aaKnown RBP2.25□□□□□ -2.05
SCFD1-219ENST00000556413 LYNP07948 512 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 FHP07954 510 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 KRT7P08729 469 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 CCDC159P0C7I6 412 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 OR9G9P0C7N8 305 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 VDRP11473 427 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 ADRB3P13945 408 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 HNRNPA2B1P22626 353 aaKnown RBP2.25□□□□□ -2.05
SCFD1-219ENST00000556413 AK4P27144 223 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-219ENST00000556413 HNRNPH3P31942 346 aaKnown RBP2.25□□□□□ -2.05
SCFD1-219ENST00000556413 HMGCLP35914 325 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 MAGEB1P43366 347 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 SYKP43405 635 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 IER3P46695 156 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 FNTAP49354 379 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 CCNHP51946 323 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-219ENST00000556413 WNT4P56705 351 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 ARF5P84085 180 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 C16orf72Q14CZ0 275 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 KLHL40Q2TBA0 621 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 DEFB109BQ30KR1 87 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 PTPN20Q4JDL3 420 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 IQCCQ4KMZ1 466 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 RWDD4Q6NW29 188 aaKnown RBP2.25□□□□□ -2.05
SCFD1-219ENST00000556413 CASC4Q6P4E1 433 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 ZNF730Q6ZMV8 503 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 RFLNAQ6ZTI6 216 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 PARGQ86W56 976 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 TRIM69Q86WT6 500 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 ENTHD1Q8IYW4 607 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 PYROXD2Q8N2H3 581 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 ARHGAP18Q8N392 663 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 BEST4Q8NFU0 473 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 OR2L5Q8NG80 312 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 FIBINQ8TAL6 211 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 NAT14Q8WUY8 206 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 CKAP2Q8WWK9 683 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 OR1E3Q8WZA6 343 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 TAF4BQ92750 862 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 CELF6Q96J87 481 aaKnown RBP2.25□□□□□ -2.05
SCFD1-219ENST00000556413 ZNF578Q96N58 590 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-219ENST00000556413 SERPINB11Q96P15 392 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 KLF6Q99612 283 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-219ENST00000556413 C17orf62Q9BQA9 187 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 FEM1AQ9BSK4 669 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 ACPTQ9BZG2 426 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 NT5DC2Q9H857 520 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 CYP3A43Q9HB55 503 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 APMAPQ9HDC9 416 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 UBE2TQ9NPD8 197 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-219ENST00000556413 DYRK4Q9NR20 520 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 ABCC13Q9NSE7 274 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 ZNF319Q9P2F9 582 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 STOML2Q9UJZ1 356 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 TRAF3IP3Q9Y228 551 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 MFHAS1Q9Y4C4 1052 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 PCYT1BQ9Y5K3 369 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-219ENST00000556413 FADS3Q9Y5Q0 445 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 MYO18AQ92614 2054 aaKnown RBP2.25□□□□□ -2.05
SCFD1-219ENST00000556413 PTPRQQ9UMZ3 2332 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 CSMD1Q96PZ7 3565 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 ZFC3H1O60293 1989 aaKnown RBP2.25□□□□□ -2.05
SCFD1-219ENST00000556413 CFAP46Q8IYW2 2715 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 CEP192Q8TEP8 1941 aa2.25□□□□□ -2.05
SCFD1-219ENST00000556413 PI4KAP42356 2102 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 A0A087X0K7 114 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 SPTY2D1-AS1A0A0U1RR47 76 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 PVALEFA0A1B0GWK0 134 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 CCT8L1PA6NM43 557 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 C10orf142B7Z368 130 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 CETN3O15182 167 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 YKT6O15498 198 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 CD160O95971 181 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 IGLV3-25P01717 112 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 SLC4A1P02730 911 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 CSF2P04141 144 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 ALOX5P09917 674 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 ALPPL2P10696 532 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 OAS2P29728 719 aaKnown RBP2.24□□□□□ -2.05
SCFD1-219ENST00000556413 ALDH3B1P43353 468 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 GNPDA1P46926 289 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 KLK7P49862 253 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 SERPINH1P50454 418 aaKnown RBP2.24□□□□□ -2.05
SCFD1-219ENST00000556413 AP3M2P53677 418 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 RPL27P61353 136 aaKnown RBP2.24□□□□□ -2.05
SCFD1-219ENST00000556413 PAX2Q02962 417 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 SLC17A1Q14916 467 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 RABGAP1LQ5R372 815 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 AGAP6Q5VW22 663 aa2.24□□□□□ -2.05
SCFD1-219ENST00000556413 Q6P435 159 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms