RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 NDRG3Q9UGV2 375 aa9.86□□□□□ -0.83
DDB1-222ENST00000543627 USP22Q9UPT9 525 aa9.86□□□□□ -0.83
DDB1-222ENST00000543627 CHST2Q9Y4C5 530 aa9.86□□□□□ -0.83
DDB1-222ENST00000543627 SH3D21A4FU49 640 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 ELOA3DA6NLF2 546 aaPredicted RBP9.85□□□□□ -0.83
DDB1-222ENST00000543627 CCT8L1PA6NM43 557 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 M0R3H8 397 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 SMAD9O15198 467 aaKnown RBP9.85□□□□□ -0.83
DDB1-222ENST00000543627 SS18L1O75177 396 aaPredicted RBP9.85□□□□□ -0.83
DDB1-222ENST00000543627 YES1P07947 543 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 IGFBP2P18065 325 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 DRD4P21917 467 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 AGTR1P30556 359 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 PRKAR1BP31321 381 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 IDUAP35475 653 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 CD79BP40259 229 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 RGS8P57771 180 aaPredicted RBP9.85□□□□□ -0.83
DDB1-222ENST00000543627 IL1RL1Q01638 556 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 DMTNQ08495 405 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 RBBP4Q09028 425 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 ELOA3BQ3SY89 546 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 FBXL19-AS1Q494R0 122 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 P3H2Q8IVL5 708 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 ZNF100Q8IYN0 542 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 UBE2J2Q8N2K1 259 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 SLC43A2Q8N370 569 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 ELOA3Q8NG57 546 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 RP9Q8TA86 221 aaKnown RBP9.85□□□□□ -0.83
DDB1-222ENST00000543627 RNF128Q8TEB7 428 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 GPATCH1Q9BRR8 931 aaKnown RBP9.85□□□□□ -0.83
DDB1-222ENST00000543627 NAA11Q9BSU3 229 aaPredicted RBP9.85□□□□□ -0.83
DDB1-222ENST00000543627 MED18Q9BUE0 208 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 POLDIP3Q9BY77 421 aaKnown RBP9.85□□□□□ -0.83
DDB1-222ENST00000543627 TMEM27Q9HBJ8 222 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 MCCC2Q9HCC0 563 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 PLSCR4Q9NRQ2 329 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 C6orf203Q9P0P8 240 aaPredicted RBP9.85□□□□□ -0.83
DDB1-222ENST00000543627 KLHL9Q9P2J3 617 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 HDGFL3Q9Y3E1 203 aa9.85□□□□□ -0.83
DDB1-222ENST00000543627 C16orf97H3BN30 126 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 ETV2O00321 342 aaPredicted RBP9.84□□□□□ -0.83
DDB1-222ENST00000543627 GSTA4O15217 222 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 ZNF208O43345 1280 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 CYTIPO60759 359 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 MFN2O95140 757 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 AKR7A3O95154 331 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 PMS2P2O95744 297 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 CGAP01215 116 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 IGHV3-9P01782 118 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 CD8BP10966 210 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 EPXP11678 715 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 IMPDH2P12268 514 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 FKBP2P26885 142 aaKnown RBP9.84□□□□□ -0.83
DDB1-222ENST00000543627 GTF2E2P29084 291 aaKnown RBP9.84□□□□□ -0.83
DDB1-222ENST00000543627 ADSLP30566 484 aaPredicted RBP9.84□□□□□ -0.83
DDB1-222ENST00000543627 PEX19P40855 299 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 RPS5P46782 204 aaKnown RBP9.84□□□□□ -0.83
DDB1-222ENST00000543627 NUDT2P50583 147 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 SLC35A1P78382 337 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 OR1Q1Q15612 314 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 TSC22D1Q15714 1073 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 DUSP7Q16829 419 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 VMACQ2NL98 169 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 INTS11Q5TA45 600 aaKnown RBP9.84□□□□□ -0.83
DDB1-222ENST00000543627 TMEM225Q6GV28 225 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 DHRS4L2Q6PKH6 230 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 BEND4Q6ZU67 534 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 GPAT4Q86UL3 456 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 COMTD1Q86VU5 262 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 C10orf53Q8N6V4 93 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 FAM222BQ8WU58 562 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 C14orf79Q96F83 325 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 LURAP1Q96LR2 239 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 WFIKKN1Q96NZ8 548 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 MCHR1Q99705 422 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 PSD2Q9BQI7 771 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 ADAM19Q9H013 955 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 EFCAB1Q9HAE3 211 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 FANCFQ9NPI8 374 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 ELOVL5Q9NYP7 299 aa9.84□□□□□ -0.83
DDB1-222ENST00000543627 NOSIPQ9Y314 301 aaKnown RBP9.84□□□□□ -0.83
DDB1-222ENST00000543627 A0A1B0GWA3 101 aa9.83□□□□□ -0.84
DDB1-222ENST00000543627 CPSF4LA6NMK7 179 aaKnown RBP9.83□□□□□ -0.84
DDB1-222ENST00000543627 A8MVM7 634 aa9.83□□□□□ -0.84
DDB1-222ENST00000543627 FAAHO00519 579 aa9.83□□□□□ -0.84
DDB1-222ENST00000543627 SNX3O60493 162 aa9.83□□□□□ -0.84
DDB1-222ENST00000543627 RAMP1O60894 148 aa9.83□□□□□ -0.84
DDB1-222ENST00000543627 SHOX2O60902 331 aaPredicted RBP9.83□□□□□ -0.84
DDB1-222ENST00000543627 AHSA1O95433 338 aa9.83□□□□□ -0.84
DDB1-222ENST00000543627 ADAP00813 363 aa9.83□□□□□ -0.84
DDB1-222ENST00000543627 NPPAP01160 153 aa9.83□□□□□ -0.84
DDB1-222ENST00000543627 GPIP06744 558 aa9.83□□□□□ -0.84
DDB1-222ENST00000543627 PCGF2P35227 344 aa9.83□□□□□ -0.84
DDB1-222ENST00000543627 UGT2B10P36537 528 aa9.83□□□□□ -0.84
DDB1-222ENST00000543627 CLK1P49759 484 aaKnown RBP9.83□□□□□ -0.84
DDB1-222ENST00000543627 LRRC23Q53EV4 343 aaPredicted RBP9.83□□□□□ -0.84
DDB1-222ENST00000543627 COQ5Q5HYK3 327 aa9.83□□□□□ -0.84
DDB1-222ENST00000543627 ALG10BQ5I7T1 473 aa9.83□□□□□ -0.84
DDB1-222ENST00000543627 OTUD3Q5T2D3 398 aaPredicted RBP9.83□□□□□ -0.84
DDB1-222ENST00000543627 C1orf140Q5VVS0 124 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms