RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 RANBP3LQ86VV4 465 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P23-201ENST00000518743 SLC22A16Q86VW1 577 aa4.03□□□□□ -1.76
HMGB1P23-201ENST00000518743 GVQW1Q8N7I0 195 aa4.03□□□□□ -1.76
HMGB1P23-201ENST00000518743 OR5AP2Q8NGF4 316 aa4.03□□□□□ -1.76
HMGB1P23-201ENST00000518743 GATAD1Q8WUU5 269 aa4.03□□□□□ -1.76
HMGB1P23-201ENST00000518743 C16orf58Q96GQ5 468 aa4.03□□□□□ -1.76
HMGB1P23-201ENST00000518743 PCED1BQ96HM7 432 aa4.03□□□□□ -1.76
HMGB1P23-201ENST00000518743 TSPAN18Q96SJ8 248 aa4.03□□□□□ -1.76
HMGB1P23-201ENST00000518743 DCTN5Q9BTE1 182 aa4.03□□□□□ -1.76
HMGB1P23-201ENST00000518743 PAPOLGQ9BWT3 736 aaKnown RBP4.03□□□□□ -1.76
HMGB1P23-201ENST00000518743 BEX2Q9BXY8 128 aa4.03□□□□□ -1.76
HMGB1P23-201ENST00000518743 RMND5AQ9H871 391 aa4.03□□□□□ -1.76
HMGB1P23-201ENST00000518743 C3orf14Q9HBI5 128 aa4.03□□□□□ -1.76
HMGB1P23-201ENST00000518743 KCNJ16Q9NPI9 418 aa4.03□□□□□ -1.76
HMGB1P23-201ENST00000518743 LHX9Q9NQ69 397 aa4.03□□□□□ -1.76
HMGB1P23-201ENST00000518743 LHX3Q9UBR4 397 aa4.03□□□□□ -1.76
HMGB1P23-201ENST00000518743 DIMT1Q9UNQ2 313 aaKnown RBP4.03□□□□□ -1.76
HMGB1P23-201ENST00000518743 MEMO1Q9Y316 297 aa4.03□□□□□ -1.76
HMGB1P23-201ENST00000518743 RRP15Q9Y3B9 282 aaKnown RBP4.03□□□□□ -1.76
HMGB1P23-201ENST00000518743 NOTCH3Q9UM47 2321 aa4.03□□□□□ -1.77
HMGB1P23-201ENST00000518743 FREM1Q5H8C1 2179 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 ARHGEF35A5YM69 484 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 SLC37A4O43826 429 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 CIDEAO60543 219 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 SLITRK3O94933 977 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 AP2A2O94973 939 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 C4BPBP20851 252 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 UGT1A4P22310 534 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 GJB2P29033 226 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 PTPN6P29350 595 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 CA5AP35218 305 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 FHITP49789 147 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 TDGF1P3P51864 188 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 PEX3P56589 373 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 RPS21P63220 83 aaKnown RBP4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 GUCY2DQ02846 1103 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 KRT81Q14533 505 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 HAGHQ16775 308 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 GTDC1Q4AE62 458 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 FILIP1LQ4L180 1135 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 LDLRAP1Q5SW96 308 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 C3P1Q6ZMU1 363 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 Q6ZVQ6 151 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 ZER1Q7Z7L7 766 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 WDR49Q8IV35 697 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 SLC22A15Q8IZD6 547 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 GCNT2Q8N0V5 402 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 MAPK1IP1LQ8NDC0 245 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 ICA1LQ8NDH6 482 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 OR4C3Q8NH37 302 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 SMPDL3AQ92484 453 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 TMA16Q96EY4 203 aaKnown RBP4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 ERGIC2Q96RQ1 377 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 MED10Q9BTT4 135 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 RAB11FIP5Q9BXF6 653 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 UCK2Q9BZX2 261 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 ELOVL4Q9GZR5 314 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 SIX2Q9NPC8 291 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 MAN2C1Q9NTJ4 1040 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 ZNF624Q9P2J8 865 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 ATP6V1HQ9UI12 483 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 POMT2Q9UKY4 750 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 CDH9Q9ULB4 789 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 RABL2BQ9UNT1 228 aa4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 FARSAQ9Y285 508 aaKnown RBP4.02□□□□□ -1.77
HMGB1P23-201ENST00000518743 C15orf38-AP3S2A0A0A6YYH1 394 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 A8MUI8 341 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 SMIM1B2RUZ4 78 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 H3BTX0 84 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 CLDN5O00501 218 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 RIPK2O43353 540 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 BUB3O43684 328 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 TBL1XO60907 577 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 DNAJB6O75190 326 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 ANP32DO95626 131 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 FCER2P06734 321 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 F7P08709 466 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 MX1P20591 662 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 GPX3P22352 226 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 GLRA1P23415 457 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 PSMA2P25787 234 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 FCGR2BP31994 310 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 GPR183P32249 361 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 NDST1P52848 882 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 ARFIP1P53367 373 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 ACTR1AP61163 376 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 ACTG1P63261 375 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 SPIBQ01892 262 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 KYAT1Q16773 422 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 ZSWIM7Q19AV6 140 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 PARP6Q2NL67 630 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 ACSF3Q4G176 576 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 PIP5KL1Q5T9C9 394 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 LIPJQ5W064 366 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 KIAA1161Q6NSJ0 714 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 PRSS57Q6UWY2 283 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 SH2D5Q6ZV89 423 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 PAQR9Q6ZVX9 377 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 CENPUQ71F23 418 aa4.01□□□□□ -1.77
HMGB1P23-201ENST00000518743 FAM131BQ86XD5 332 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms