RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 NDUFB2O95178 105 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 RAB36O95755 333 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 FADS2O95864 444 aaKnown RBP9.37□□□□□ -0.91
HDAC3-214ENST00000495485 THY1P04216 161 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 TP53P04637 393 aaPredicted RBP9.37□□□□□ -0.91
HDAC3-214ENST00000495485 LIFP15018 202 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 MYL12AP19105 171 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 PSMB9P28065 219 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 NOS3P29474 1203 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 EVI2BP34910 448 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 MAP2K6P52564 334 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 RRADP55042 308 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 CRYZQ08257 329 aaKnown RBP9.37□□□□□ -0.91
HDAC3-214ENST00000495485 RAB40BQ12829 278 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 SMN1Q16637 294 aaKnown RBP9.37□□□□□ -0.91
HDAC3-214ENST00000495485 BTBD16Q32M84 506 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 TIMM50Q3ZCQ8 353 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 SYT6Q5T7P8 510 aaPredicted RBP9.37□□□□□ -0.91
HDAC3-214ENST00000495485 UBE2UQ5VVX9 321 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 GPR107Q5VW38 600 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 FOXB2Q5VYV0 432 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 XAF1Q6GPH4 301 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 ARHGAP11AQ6P4F7 1023 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 KIRREL2Q6UWL6 708 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 ZNF367Q7RTV3 350 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 CCDC103Q8IW40 242 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 PRR22Q8IZ63 422 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 POGLUT1Q8NBL1 392 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 LSM14AQ8ND56 463 aaKnown RBP9.37□□□□□ -0.91
HDAC3-214ENST00000495485 OR5W2Q8NH69 310 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 B4GALNT2Q8NHY0 566 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 FAR1Q8WVX9 515 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 TMIGD2Q96BF3 282 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 ISOC1Q96CN7 298 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 NMD3Q96D46 503 aaKnown RBP9.37□□□□□ -0.91
HDAC3-214ENST00000495485 DTNBP1Q96EV8 351 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 WBP1Q96G27 269 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 LRR1Q96L50 414 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 SAMD8Q96LT4 415 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 IFT27Q9BW83 186 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 LHPPQ9H008 270 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 ZNF700Q9H0M5 742 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 ZBTB20Q9HC78 741 aaPredicted RBP9.37□□□□□ -0.91
HDAC3-214ENST00000495485 KLHL21Q9UJP4 597 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 POLHQ9Y253 713 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 SLC6A5Q9Y345 797 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 BOD1L1Q8NFC6 3051 aa9.37□□□□□ -0.91
HDAC3-214ENST00000495485 PRR23D1E9PI22 279 aaPredicted RBP9.36□□□□□ -0.91
HDAC3-214ENST00000495485 KPNA4O00629 521 aaPredicted RBP9.36□□□□□ -0.91
HDAC3-214ENST00000495485 MYL12BO14950 172 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 SURF4O15260 269 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 PIP5K1CO60331 668 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 FADS1O60427 444 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 OR7A10O76100 309 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 LYPD3O95274 346 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 PRR23D2P0DMB1 279 aaPredicted RBP9.36□□□□□ -0.91
HDAC3-214ENST00000495485 DBTP11182 482 aaKnown RBP9.36□□□□□ -0.91
HDAC3-214ENST00000495485 SFTPCP11686 197 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 ZNF3P17036 446 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 CCNA2P20248 432 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 FUT4P22083 530 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 ATP6V1E1P36543 226 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 SLC15A1P46059 708 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 POLR2HP52434 150 aaKnown RBP9.36□□□□□ -0.91
HDAC3-214ENST00000495485 CLEC12AQ5QGZ9 265 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 NXNL2Q5VZ03 156 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 GTF2IRD2BQ6EKJ0 949 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 ACSM5Q6NUN0 579 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 OPN5Q6U736 354 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 NDUFAF7Q7L592 441 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 GTF2IRD2Q86UP8 949 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 KIF18BQ86Y91 864 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 ANKRD13BQ86YJ7 626 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 LNX2Q8N448 690 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 GATSQ8NAP1 163 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 ANKK1Q8NFD2 765 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 PFN4Q8NHR9 129 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 C3orf49Q96BT1 292 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 C12orf43Q96C57 262 aaKnown RBP9.36□□□□□ -0.91
HDAC3-214ENST00000495485 ARSGQ96EG1 525 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 MRPL48Q96GC5 212 aaKnown RBP9.36□□□□□ -0.91
HDAC3-214ENST00000495485 FER1L6-AS2Q96M78 137 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 ZNF582Q96NG8 517 aaPredicted RBP9.36□□□□□ -0.91
HDAC3-214ENST00000495485 DOK1Q99704 481 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 GPA33Q99795 319 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 MND1Q9BWT6 205 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 UBQLN3Q9H347 655 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 DSN1Q9H410 356 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 MRPS18AQ9NVS2 196 aaKnown RBP9.36□□□□□ -0.91
HDAC3-214ENST00000495485 PAK1IP1Q9NWT1 392 aaPredicted RBP9.36□□□□□ -0.91
HDAC3-214ENST00000495485 GPR83Q9NYM4 423 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 MYOTQ9UBF9 498 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 SIGLEC7Q9Y286 467 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 EXOSC1Q9Y3B2 195 aaKnown RBP9.36□□□□□ -0.91
HDAC3-214ENST00000495485 ATRXP46100 2492 aa9.36□□□□□ -0.91
HDAC3-214ENST00000495485 IGHV1-45A0A0A0MS14 117 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 NSG1A0A0A6YYJ2 146 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 IGHV3-20A0A0C4DH32 117 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 A0A1W2PQ72 361 aa9.35□□□□□ -0.91
HDAC3-214ENST00000495485 CDC14CA4D256 554 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms