RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 FRS3O43559 492 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 RAMP1O60894 148 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 ATE1O95260 518 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 ADAP00813 363 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 RAF1P04049 648 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 ARAFP10398 606 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 PPP3CBP16298 524 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 GPX2P18283 190 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 PPIBP23284 216 aaKnown RBP11.44□□□□□ -0.58
HDAC1-209ENST00000484305 LOXP28300 417 aaPredicted RBP11.44□□□□□ -0.58
HDAC1-209ENST00000484305 OR3A2P47893 321 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 OR2B6P58173 313 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 HOXC5Q00444 222 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 BNIP2Q12982 314 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 ZSWIM7Q19AV6 140 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 GCNT6Q5T4J0 391 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 WBP2NLQ6ICG8 309 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 RETREG3Q86VR2 466 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 CCDC103Q8IW40 242 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 BBS10Q8TAM1 723 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 S100PBPQ96BU1 408 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 HS3ST6Q96QI5 342 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 FOXC2Q99958 501 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 SIKE1Q9BRV8 207 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 TMEM120AQ9BXJ8 343 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 CXXC4Q9H2H0 198 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 ARMC7Q9H6L4 198 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 CACYBPQ9HB71 228 aaKnown RBP11.44□□□□□ -0.58
HDAC1-209ENST00000484305 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.44□□□□□ -0.58
HDAC1-209ENST00000484305 PRSS50Q9UI38 385 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 LEF1Q9UJU2 399 aaPredicted RBP11.44□□□□□ -0.58
HDAC1-209ENST00000484305 EDARQ9UNE0 448 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 TRAPPC4Q9Y296 219 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 GPR52Q9Y2T5 361 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 NDUFAF1Q9Y375 327 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 ITPR3Q14573 2671 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 ROS1P08922 2347 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 RAI1Q7Z5J4 1906 aaPredicted RBP11.43□□□□□ -0.58
HDAC1-209ENST00000484305 IGKV3D-15A0A087WSY6 115 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 KLF4O43474 513 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 DNPH1O43598 174 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 ETS2P15036 469 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 FPR1P21462 350 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 CXCR1P25024 350 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 NTF4P34130 210 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 MAP2K6P52564 334 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 COPZ1P61923 177 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 H3F3AP84243 136 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 CDK6Q00534 326 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 SF3A3Q12874 501 aaKnown RBP eCLIP11.43□□□□□ -0.581e-15■■■■■ 34.2
HDAC1-209ENST00000484305 KEAP1Q14145 624 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 PDK3Q15120 406 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 ADRM1Q16186 407 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 RUNDC3AQ59EK9 446 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 SFRP5Q5T4F7 317 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 REEP3Q6NUK4 255 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 GALNT5Q7Z7M9 940 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 COMTD1Q86VU5 262 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 WFDC8Q8IUA0 241 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 DPP10Q8N608 796 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 ZHX1-C8orf76Q96EF9 292 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 CPPED1Q9BRF8 314 aaPredicted RBP11.43□□□□□ -0.58
HDAC1-209ENST00000484305 HDHD5Q9BXW7 423 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 OR10A4Q9H209 315 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 TMEM38AQ9H6F2 299 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 FGFR1OP2Q9NVK5 253 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 CORO2BQ9UQ03 480 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 DSCAMO60469 2012 aa11.43□□□□□ -0.58
HDAC1-209ENST00000484305 MAP1AP78559 2803 aaPredicted RBP11.42□□□□□ -0.58
HDAC1-209ENST00000484305 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.42□□□□□ -0.58
HDAC1-209ENST00000484305 EVPLLA8MZ36 301 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 ANGPT2O15123 496 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 TPST1O60507 370 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 CD53P19397 219 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 SLC35A1P78382 337 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 ITGADQ13349 1161 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 CEACAM7Q14002 265 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 SCARB2Q14108 478 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 SELPLGQ14242 412 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 P2RY6Q15077 328 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 GLIPR1L2Q4G1C9 344 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 METTL21CQ5VZV1 264 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 ALKBH2Q6NS38 261 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 CGB2Q6NT52 195 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 Q6ZT83 130 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 DHDDSQ86SQ9 333 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 ZNF100Q8IYN0 542 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 STEAP2Q8NFT2 490 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 PIGXQ8TBF5 258 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 TSPEARQ8WU66 669 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 C3orf49Q96BT1 292 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 MBD6Q96DN6 1003 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 CGREF1Q99674 301 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 POTEKPQ9BYX7 375 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 EMC3Q9P0I2 261 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 PRDM4Q9UKN5 801 aa11.42□□□□□ -0.58
HDAC1-209ENST00000484305 NOSIPQ9Y314 301 aaKnown RBP11.42□□□□□ -0.58
HDAC1-209ENST00000484305 LIPT2A6NK58 231 aa11.41□□□□□ -0.58
HDAC1-209ENST00000484305 EIF1BO60739 113 aaKnown RBP11.41□□□□□ -0.58
HDAC1-209ENST00000484305 LYZL6O75951 148 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms