RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 RRM2P31350 389 aa11.9□□□□□ -0.5
HDAC1-208ENST00000482310 IFNA8P32881 189 aa11.9□□□□□ -0.5
HDAC1-208ENST00000482310 RPS5P46782 204 aaKnown RBP11.9□□□□□ -0.5
HDAC1-208ENST00000482310 RAC1P63000 192 aa11.9□□□□□ -0.5
HDAC1-208ENST00000482310 PPP1R8Q12972 351 aaKnown RBP11.9□□□□□ -0.5
HDAC1-208ENST00000482310 SGCBQ16585 318 aa11.9□□□□□ -0.5
HDAC1-208ENST00000482310 GXYLT1Q4G148 440 aa11.9□□□□□ -0.5
HDAC1-208ENST00000482310 NHSL2Q5HYW2 709 aa11.9□□□□□ -0.5
HDAC1-208ENST00000482310 C1QL3Q5VWW1 255 aa11.9□□□□□ -0.5
HDAC1-208ENST00000482310 HBMQ6B0K9 141 aa11.9□□□□□ -0.5
HDAC1-208ENST00000482310 NCCRP1Q6ZVX7 275 aaPredicted RBP11.9□□□□□ -0.5
HDAC1-208ENST00000482310 C10orf53Q8N6V4 93 aa11.9□□□□□ -0.5
HDAC1-208ENST00000482310 PFN4Q8NHR9 129 aa11.9□□□□□ -0.5
HDAC1-208ENST00000482310 FAM57AQ8TBR7 257 aa11.9□□□□□ -0.5
HDAC1-208ENST00000482310 PYDC1Q8WXC3 89 aa11.9□□□□□ -0.5
HDAC1-208ENST00000482310 SLC25A36Q96CQ1 311 aa11.9□□□□□ -0.5
HDAC1-208ENST00000482310 TRIB1Q96RU8 372 aa11.9□□□□□ -0.5
HDAC1-208ENST00000482310 PIP5K1AQ99755 562 aa11.9□□□□□ -0.5
HDAC1-208ENST00000482310 TUBA1CQ9BQE3 449 aa11.9□□□□□ -0.5
HDAC1-208ENST00000482310 CHID1Q9BWS9 393 aa11.9□□□□□ -0.5
HDAC1-208ENST00000482310 DENND2DQ9H6A0 471 aaPredicted RBP11.9□□□□□ -0.5
HDAC1-208ENST00000482310 MAGIXQ9H6Y5 334 aa11.9□□□□□ -0.5
HDAC1-208ENST00000482310 IL1RAPQ9NPH3 570 aa11.9□□□□□ -0.5
HDAC1-208ENST00000482310 STOML1Q9UBI4 398 aa11.9□□□□□ -0.5
HDAC1-208ENST00000482310 OR14I1A6ND48 311 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 GJE1A6NN92 205 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 PRRG2O14669 202 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 BCKDKO14874 412 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 CXCL13O43927 109 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 FKBP6O75344 327 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 TIPRLO75663 272 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 H1F0P07305 194 aaKnown RBP11.89□□□□□ -0.51
HDAC1-208ENST00000482310 PNMTP11086 282 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 RHCEP18577 417 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 UGT2B15P54855 530 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 CLDN15P56746 228 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 OR2B6P58173 313 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 ST3GAL3Q11203 375 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 MYBPHQ13203 477 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 EIF2S3LQ2VIR3 472 aaKnown RBP11.89□□□□□ -0.51
HDAC1-208ENST00000482310 EMC4Q5J8M3 183 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 TTC33Q6PID6 262 aaPredicted RBP11.89□□□□□ -0.51
HDAC1-208ENST00000482310 CHMP1BQ7LBR1 199 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 ATCAYQ86WG3 371 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 OFCC1Q8IZS5 231 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 RPRMLQ8N4K4 120 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 OR10D3Q8NH80 312 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 OR2V1Q8NHB1 315 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 PRR7Q8TB68 274 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 SLC38A4Q969I6 547 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 SLCO4A1Q96BD0 722 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 KTI12Q96EK9 354 aaPredicted RBP11.89□□□□□ -0.51
HDAC1-208ENST00000482310 PRSS27Q9BQR3 290 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 SRXN1Q9BYN0 137 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 COQ10BQ9H8M1 238 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 U3KQV3 271 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 COL12A1Q99715 3063 aa11.89□□□□□ -0.51
HDAC1-208ENST00000482310 INTS1Q8N201 2190 aaKnown RBP11.88□□□□□ -0.51
HDAC1-208ENST00000482310 IGKV1D-42A0A075B6H8 117 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 A0A087WUJ7 227 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 TRBV4-1A0A0J9YWV2 114 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 CLCA1A8K7I4 914 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 A8MVM7 634 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 LRRN3E7EW58 273 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 LINC01387J3KSC0 135 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 SULT2B1O00204 365 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 GNGT2O14610 69 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 ENTPD5O75356 428 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 PRSS23O95084 383 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 GADD45GO95257 159 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 AHSA1O95433 338 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 CST1P01037 141 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 UMPSP11172 480 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 KLK2P20151 261 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 IDUAP35475 653 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 DIO1P49895 249 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 DLX5P56178 289 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 ACTR3P61158 418 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 RPS3AP61247 264 aaKnown RBP11.88□□□□□ -0.51
HDAC1-208ENST00000482310 LSM11P83369 360 aaKnown RBP eCLIP11.88□□□□□ -0.51
HDAC1-208ENST00000482310 EGR4Q05215 589 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 LAPTM4AQ15012 233 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 TRAM2Q15035 370 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 OR7A5Q15622 319 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 CTU2Q2VPK5 515 aaKnown RBP11.88□□□□□ -0.51
HDAC1-208ENST00000482310 C1orf140Q5VVS0 124 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 TBPL2Q6SJ96 375 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 RPTNQ6XPR3 784 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 ZNF730Q6ZMV8 503 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 ESPNLQ6ZVH7 1005 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 PM20D2Q8IYS1 436 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 SLC25A43Q8WUT9 341 aaPredicted RBP11.88□□□□□ -0.51
HDAC1-208ENST00000482310 POLR2J2Q9GZM3 115 aaKnown RBP11.88□□□□□ -0.51
HDAC1-208ENST00000482310 PRDM14Q9GZV8 571 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 POLR2J3Q9H1A7 115 aaKnown RBP11.88□□□□□ -0.51
HDAC1-208ENST00000482310 NMNAT1Q9HAN9 279 aaPredicted RBP11.88□□□□□ -0.51
HDAC1-208ENST00000482310 MAN2C1Q9NTJ4 1040 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 VNN3Q9NY84 501 aa11.88□□□□□ -0.51
HDAC1-208ENST00000482310 C6orf203Q9P0P8 240 aaPredicted RBP11.88□□□□□ -0.51
HDAC1-208ENST00000482310 DIDO1Q9BTC0 2240 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms