RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 KCNE3Q9Y6H6 103 aa14□□□□□ -0.17
DDX56-210ENST00000479440 TMEM114B3SHH9 223 aa13.99□□□□□ -0.17
DDX56-210ENST00000479440 B4DSR2 109 aa13.99□□□□□ -0.17
DDX56-210ENST00000479440 TRIM77I1YAP6 450 aa13.99□□□□□ -0.17
DDX56-210ENST00000479440 URI1O94763 535 aaPredicted RBP13.99□□□□□ -0.17
DDX56-210ENST00000479440 IFNGR1P15260 489 aa13.99□□□□□ -0.17
DDX56-210ENST00000479440 CREB1P16220 341 aa13.99□□□□□ -0.17
DDX56-210ENST00000479440 UBE2NP61088 152 aaKnown RBP13.99□□□□□ -0.17
DDX56-210ENST00000479440 CKAP4Q07065 602 aaKnown RBP13.99□□□□□ -0.17
DDX56-210ENST00000479440 CCNIQ14094 377 aa13.99□□□□□ -0.17
DDX56-210ENST00000479440 LSM12Q3MHD2 195 aaKnown RBP13.99□□□□□ -0.17
DDX56-210ENST00000479440 RFTN2Q52LD8 501 aaPredicted RBP13.99□□□□□ -0.17
DDX56-210ENST00000479440 HIKESHIQ53FT3 197 aa13.99□□□□□ -0.17
DDX56-210ENST00000479440 LIPMQ5VYY2 423 aa13.99□□□□□ -0.17
DDX56-210ENST00000479440 CNPY4Q8N129 248 aa13.99□□□□□ -0.17
DDX56-210ENST00000479440 POMGNT2Q8NAT1 580 aa13.99□□□□□ -0.17
DDX56-210ENST00000479440 OR4F15Q8NGB8 312 aa13.99□□□□□ -0.17
DDX56-210ENST00000479440 OR5D16Q8NGK9 328 aa13.99□□□□□ -0.17
DDX56-210ENST00000479440 OR2T11Q8NH01 316 aa13.99□□□□□ -0.17
DDX56-210ENST00000479440 FAM216AQ8WUB2 273 aa13.99□□□□□ -0.17
DDX56-210ENST00000479440 OIT3Q8WWZ8 545 aa13.99□□□□□ -0.17
DDX56-210ENST00000479440 TMEM45BQ96B21 275 aa13.99□□□□□ -0.17
DDX56-210ENST00000479440 BOD1Q96IK1 185 aa13.99□□□□□ -0.17
DDX56-210ENST00000479440 SDF2Q99470 211 aa13.99□□□□□ -0.17
DDX56-210ENST00000479440 RBM4Q9BWF3 364 aaKnown RBP13.99□□□□□ -0.17
DDX56-210ENST00000479440 TNFRSF12AQ9NP84 129 aa13.99□□□□□ -0.17
DDX56-210ENST00000479440 TMEM181Q9P2C4 612 aa13.99□□□□□ -0.17
DDX56-210ENST00000479440 SLC35A3Q9Y2D2 325 aa13.99□□□□□ -0.17
DDX56-210ENST00000479440 ARFGEF3Q5TH69 2177 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 DUXAA6NLW8 204 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 VSTM5A8MXK1 200 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 G3V2L1 256 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 hCG_2039718K7EN88 272 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 KLF11O14901 512 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 LSM1O15116 133 aaKnown RBP13.98□□□□□ -0.17
DDX56-210ENST00000479440 GLRA3O75311 464 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 STX11O75558 287 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 UGT2B17O75795 530 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 CDH2P19022 906 aaPredicted RBP13.98□□□□□ -0.17
DDX56-210ENST00000479440 MAPK1P28482 360 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 CASQ1P31415 396 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 SOAT1P35610 550 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 DNAJB13P59910 316 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 SLC35A1P78382 337 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 GALNTL6Q49A17 601 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 HOMEZQ8IX15 550 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 ZNF786Q8N393 782 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 NUP37Q8NFH4 326 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 OR5AK3PQ8NH89 298 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 DDIT4LQ96D03 193 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 OR11A1Q9GZK7 315 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 ZNF442Q9H7R0 627 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 DYNLRB1Q9NP97 96 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 DCDC2Q9UHG0 476 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 PCDHGB4Q9UN71 923 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 TRAPPC4Q9Y296 219 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 FIS1Q9Y3D6 152 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 GRIP1Q9Y3R0 1128 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 MEGF8Q7Z7M0 2845 aa13.98□□□□□ -0.17
DDX56-210ENST00000479440 AZIN1O14977 448 aa13.97□□□□□ -0.17
DDX56-210ENST00000479440 KRT33AO76009 404 aa13.97□□□□□ -0.17
DDX56-210ENST00000479440 C6orf47O95873 294 aa13.97□□□□□ -0.17
DDX56-210ENST00000479440 BCKDHAP12694 445 aa13.97□□□□□ -0.17
DDX56-210ENST00000479440 LIMS1P48059 325 aa13.97□□□□□ -0.17
DDX56-210ENST00000479440 KHKP50053 298 aa13.97□□□□□ -0.17
DDX56-210ENST00000479440 H3F3AP84243 136 aa13.97□□□□□ -0.17
DDX56-210ENST00000479440 NAAAQ02083 359 aa13.97□□□□□ -0.17
DDX56-210ENST00000479440 RIN1Q13671 783 aa13.97□□□□□ -0.17
DDX56-210ENST00000479440 SLC17A1Q14916 467 aa13.97□□□□□ -0.17
DDX56-210ENST00000479440 TRIP10Q15642 601 aa13.97□□□□□ -0.17
DDX56-210ENST00000479440 C3orf36Q3SXR2 165 aa13.97□□□□□ -0.17
DDX56-210ENST00000479440 FAM153CQ494X1 144 aa13.97□□□□□ -0.17
DDX56-210ENST00000479440 TEX29Q8N6K0 151 aa13.97□□□□□ -0.17
DDX56-210ENST00000479440 FAM71CQ8NEG0 241 aa13.97□□□□□ -0.17
DDX56-210ENST00000479440 OR7A2PQ8NGA2 310 aa13.97□□□□□ -0.17
DDX56-210ENST00000479440 UBASH3BQ8TF42 649 aa13.97□□□□□ -0.17
DDX56-210ENST00000479440 ZNF317Q96PQ6 595 aaPredicted RBP13.97□□□□□ -0.17
DDX56-210ENST00000479440 JMJD8Q96S16 334 aa13.97□□□□□ -0.17
DDX56-210ENST00000479440 ZNF350Q9GZX5 532 aa13.97□□□□□ -0.17
DDX56-210ENST00000479440 TMEM45AQ9NWC5 275 aa13.97□□□□□ -0.17
DDX56-210ENST00000479440 PCDHB10Q9UN67 800 aa13.97□□□□□ -0.17
DDX56-210ENST00000479440 DYSFO75923 2080 aa13.97□□□□□ -0.17
DDX56-210ENST00000479440 CENPVL1A0A0U1RR11 272 aa13.96□□□□□ -0.17
DDX56-210ENST00000479440 ABHD2P08910 425 aa13.96□□□□□ -0.17
DDX56-210ENST00000479440 LAMP1P11279 417 aa13.96□□□□□ -0.17
DDX56-210ENST00000479440 GCAP28676 217 aa13.96□□□□□ -0.17
DDX56-210ENST00000479440 PGM1P36871 562 aa13.96□□□□□ -0.17
DDX56-210ENST00000479440 HTR3AP46098 478 aa13.96□□□□□ -0.17
DDX56-210ENST00000479440 HILS1P60008 231 aa13.96□□□□□ -0.17
DDX56-210ENST00000479440 ARHGAP11BQ3KRB8 267 aa13.96□□□□□ -0.17
DDX56-210ENST00000479440 TBRG1Q3YBR2 411 aa13.96□□□□□ -0.17
DDX56-210ENST00000479440 EMBQ6PCB8 327 aa13.96□□□□□ -0.17
DDX56-210ENST00000479440 PAQR6Q6TCH4 344 aa13.96□□□□□ -0.17
DDX56-210ENST00000479440 USP43Q70EL4 1123 aa13.96□□□□□ -0.17
DDX56-210ENST00000479440 AAED1Q7RTV5 226 aa13.96□□□□□ -0.17
DDX56-210ENST00000479440 C16orf62Q7Z3J2 963 aa13.96□□□□□ -0.17
DDX56-210ENST00000479440 OR1K1Q8NGR3 316 aa13.96□□□□□ -0.17
DDX56-210ENST00000479440 ANKRD27Q96NW4 1050 aa13.96□□□□□ -0.17
DDX56-210ENST00000479440 PRPF18Q99633 342 aaKnown RBP13.96□□□□□ -0.17
DDX56-210ENST00000479440 EXD2Q9NVH0 621 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms