RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 RAB18Q9NP72 206 aa3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 SMPD3Q9NY59 655 aaPredicted RBP3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 TREM2Q9NZC2 230 aa3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 NAP1L2Q9ULW6 460 aaPredicted RBP3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 CELA1Q9UNI1 258 aa3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 MEMO1Q9Y316 297 aa3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 UGT2A1Q9Y4X1 527 aa3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 RPAP1Q9BWH6 1393 aaPredicted RBP3.23□□□□□ -1.89
SMNDC1-205ENST00000477763 ARHGAP23Q9P227 1491 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 SH3TC1Q8TE82 1336 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 TRAV26-1A0A087WT03 109 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 CLRN2A0PK11 232 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 IDSB3KWA1 339 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 ZNF208O43345 1280 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 EMC8O43402 210 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 IGHDP01880 384 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 GNA11P29992 359 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 MAP3K8P41279 467 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 EFNB2P52799 333 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 CSNK1G2P78368 415 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 ASPHQ12797 758 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 ARFRP1Q13795 201 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 KLF17Q5JT82 389 aaPredicted RBP3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 OR4F3Q6IEY1 312 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 C11orf71Q6IPW1 123 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 ZSCAN25Q6NSZ9 544 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 FTMTQ8N4E7 242 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 FAM133AQ8N9E0 248 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 OR52I1Q8NGK6 324 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 CYYR1Q96J86 154 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 SLC39A3Q9BRY0 314 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 REEP4Q9H6H4 257 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 ASB8Q9H765 288 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 LRRC40Q9H9A6 602 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 FOLH1BQ9HBA9 442 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 SMOXQ9NWM0 555 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 EXTL2Q9UBQ6 330 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 CDH9Q9ULB4 789 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 POLDIP2Q9Y2S7 368 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 TIMM10BQ9Y5J6 103 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 ATAD2BQ9ULI0 1458 aa3.22□□□□□ -1.89
SMNDC1-205ENST00000477763 A0A0G2JRQ6 117 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 A0A0J9YXY3 114 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 FAM231BA6NCW3 169 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 DCTN6O00399 190 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 ABCD4O14678 606 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 UGT1A9O60656 530 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 IGLV1-47P01700 117 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 HPNP05981 417 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 HMGB2P26583 209 aaKnown RBP3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 PTGDSP41222 190 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 CASP4P49662 377 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 CEBPDP49716 269 aaPredicted RBP3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 WNT4P56705 351 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 KRTAP12-2P59991 146 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 ACTR1AP61163 376 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 TLE4Q04727 773 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 CHIT1Q13231 466 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 NSUN5P1Q3KNT7 163 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 CCDC14Q49A88 953 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 SFT2D3Q587I9 215 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 SAMD4BQ5PRF9 694 aaKnown RBP3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 C1orf146Q5VVC0 180 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 UTS2BQ765I0 119 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 OR2L13Q8N349 312 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 CATSPER1Q8NEC5 780 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 C7orf33Q8WU49 177 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 UBE2E3Q969T4 207 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 NUS1Q96E22 293 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 PAGE5Q96GU1 130 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 TBX15Q96SF7 602 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 TMEM43Q9BTV4 400 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 OR51J1Q9H342 316 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 SUDS3Q9H7L9 328 aaPredicted RBP3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 VCPKMTQ9H867 229 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 NHEJ1Q9H9Q4 299 aaPredicted RBP3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 CLEC4AQ9UMR7 237 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 V9GY05 133 aa3.21□□□□□ -1.9
SMNDC1-205ENST00000477763 RGS16O15492 202 aaPredicted RBP3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 MED7O43513 233 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 HCRTR1O43613 425 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 ATP5LO75964 103 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 LGI1O95970 557 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 P04436 131 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 RBMY1CP0DJD4 496 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 POU2F1P14859 743 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 COX7A1P24310 79 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 HTR1FP30939 366 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 CCT3P49368 545 aaKnown RBP3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 AIF1P55008 147 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 APOC4P55056 127 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 TNFRSF17Q02223 184 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 IL24Q13007 206 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 SLC15A2Q16348 729 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 IL17AQ16552 155 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 C1orf220Q5T0J3 134 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 HSDL2Q6YN16 418 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 ZCCHC7Q8N3Z6 543 aaKnown RBP3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 ZNF740Q8NDX6 193 aa3.2□□□□□ -1.9
SMNDC1-205ENST00000477763 BRSK1Q8TDC3 778 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms