RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 PDSS1Q5T2R2 415 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 OR4F3Q6IEY1 312 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 ZCCHC12Q6PEW1 402 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 PRSS57Q6UWY2 283 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 ZNF704Q6ZNC4 412 aaPredicted RBP4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 FCRLAQ7L513 359 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 R3HCC1LQ7Z5L2 792 aaKnown RBP4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 TRABD2AQ86V40 505 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 TDRPQ86YL5 185 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 CLECL1Q8IZS7 167 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 BCL6BQ8N143 479 aaPredicted RBP4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 LINC00482Q8N8I6 264 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 BANPQ8N9N5 519 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 NUDT10Q8NFP7 164 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 ZFP28Q8NHY6 868 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 GPR119Q8TDV5 335 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 ACTRT2Q8TDY3 377 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 ADAMTS15Q8TE58 950 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 NUDT11Q96G61 164 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 REXO5Q96IC2 774 aaKnown RBP4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 RAX2Q96IS3 184 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 METTL2AQ96IZ6 378 aaKnown RBP4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 KLHL15Q96M94 604 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 OR7D2Q96RA2 312 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 SDF2Q99470 211 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 CCT7Q99832 543 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 SPATA25Q9BR10 227 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 THUMPD3Q9BV44 507 aaKnown RBP4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 ACTRT3Q9BYD9 372 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 IQCGQ9H095 443 aaKnown RBP4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 PIGUQ9H490 435 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 CXorf36Q9H7Y0 433 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 ATP6V1HQ9UI12 483 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 KCNE5Q9UJ90 142 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 ADAM21Q9UKJ8 722 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 ICAM5Q9UMF0 924 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 GPR52Q9Y2T5 361 aa4.16□□□□□ -1.74
GTF3C3-208ENST00000455546 A0A0A6YYJ9 748 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 A0A1W2PQD3 144 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 A0A1W2PR80 420 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 DPRXA6NFQ7 191 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 TMEM114B3SHH9 223 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 HS3ST1O14792 307 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 BCAS1O75363 584 aaPredicted RBP4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 LYZL6O75951 148 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 CPSF4O95639 269 aaKnown RBP4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 KNG1P01042 644 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 IGHV3-9P01782 118 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 YES1P07947 543 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 NGFRP08138 427 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 SOD3P08294 240 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 G6PDP11413 515 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 NEFHP12036 1026 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 PPP3CBP16298 524 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 ZNF17P17021 662 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 CCNA2P20248 432 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 PSMB1P20618 241 aaKnown RBP4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 ATP6V1C1P21283 382 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 MATN1P21941 496 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 IL32P24001 234 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 SOAT1P35610 550 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 HPCAL1P37235 193 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 CDKN1AP38936 164 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 EIF1P41567 113 aaKnown RBP4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 ASMTP46597 345 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 CCR4P51679 360 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 ATP12AP54707 1039 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 C21orf58P58505 322 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 FGFBP1Q14512 234 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 QPRTQ15274 297 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 ZNF239Q16600 458 aaKnown RBP4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 LSM12Q3MHD2 195 aaKnown RBP4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 TIGD2Q4W5G0 525 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 ATP6AP1LQ52LC2 224 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 NCMAPQ5T1S8 102 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 PDZK1Q5T2W1 519 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 MBNL2Q5VZF2 373 aaKnown RBP4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 TFAP2EQ6VUC0 442 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 C6orf120Q7Z4R8 191 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 MTERF4Q7Z6M4 381 aaKnown RBP4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 ANKRD46Q86W74 232 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 MISPQ8IVT2 679 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 RIMKLAQ8IXN7 391 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 GABRG1Q8N1C3 465 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 TMCO5AQ8N6Q1 288 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 ZNF611Q8N823 705 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 FNDC5Q8NAU1 212 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 KBTBD8Q8NFY9 601 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 ZFP90Q8TF47 636 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 TMEM171Q8WVE6 324 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 XAGE5Q8WWM1 108 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 IGFBPL1Q8WX77 278 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 OR5P2Q8WZ92 322 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 ZNF75CPQ92670 426 aaPredicted RBP4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 HTRA1Q92743 480 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 RAB8BQ92930 207 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 CPNE4Q96A23 557 aaPredicted RBP4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 TUBGCP3Q96CW5 907 aa4.15□□□□□ -1.75
GTF3C3-208ENST00000455546 COQ8BQ96D53 544 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms