RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 LRRC70Q7Z2Q7 622 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 PID1Q7Z2X4 250 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 COMTD1Q86VU5 262 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 KLHDC8AQ8IYD2 350 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 GBP7Q8N8V2 638 aaPredicted RBP4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 TRPV3Q8NET8 790 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 TRIM58Q8NG06 486 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 RP9Q8TA86 221 aaKnown RBP4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 WIPF2Q8TF74 440 aaPredicted RBP4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 OSTF1Q92882 214 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 ZNF566Q969W8 418 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 OMA1Q96E52 524 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 DNAJA3Q96EY1 480 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 ZNF830Q96NB3 372 aaPredicted RBP4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 BIRC8Q96P09 236 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 NPAS1Q99742 590 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 ZNF416Q9BWM5 594 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 RTN4RQ9BZR6 473 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 NDST4Q9H3R1 872 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 DSN1Q9H410 356 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 ZNF442Q9H7R0 627 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 CCDC177Q9NQR7 707 aaPredicted RBP4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 SERTAD4Q9NUC0 356 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 LYARQ9NX58 379 aaKnown RBP4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 DNAJB11Q9UBS4 358 aa4.34□□□□□ -1.71
SBDSP1-204ENST00000453858 LRP2P98164 4655 aa4.34□□□□□ -1.72
SBDSP1-204ENST00000453858 IGHV1-18A0A0C4DH31 117 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 OR6C70A6NIJ9 312 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 WASHC1A8K0Z3 465 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 ZNF487B1APH4 448 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 CLGNO14967 610 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 URI1O94763 535 aaPredicted RBP4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 SYNGR4O95473 234 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 DUS4LO95620 317 aaKnown RBP4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 GOT2P00505 430 aaKnown RBP4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 OPN1LWP04000 364 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 CATP04040 527 aaKnown RBP4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 CHRM2P08172 466 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 F7P08709 466 aaPredicted RBP4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 NPR2P20594 1047 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 KDELR1P24390 212 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 CERS1P27544 350 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 GALNSP34059 522 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 IER3P46695 156 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 TIAL1Q01085 375 aaKnown RBP eCLIP4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 FOXI1Q12951 378 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 FHL2Q14192 279 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 ZNF239Q16600 458 aaKnown RBP4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 CTSL3PQ5NE16 218 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 MRNIPQ6NTE8 343 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 BRD3OSQ6XYD6 125 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 ZNF627Q7L945 461 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 NDUFA11Q86Y39 141 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 MYLK4Q86YV6 388 aaPredicted RBP4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 ST13P4Q8IZP2 240 aaPredicted RBP4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 C7orf57Q8NEG2 295 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 NUP37Q8NFH4 326 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 OR2V1Q8NHB1 315 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 ACTRT2Q8TDY3 377 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 CKAP2Q8WWK9 683 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 RIT1Q92963 219 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 RFKQ969G6 155 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 PANX3Q96QZ0 392 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 NDNQ99608 321 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 MAPKAP1Q9BPZ7 522 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 LYRM4Q9HD34 91 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 INPP5EQ9NRR6 644 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 MED11Q9P086 117 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 MARCH4Q9P2E8 410 aaPredicted RBP4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 HOOK1Q9UJC3 728 aaKnown RBP4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 PDE10AQ9Y233 779 aa4.33□□□□□ -1.72
SBDSP1-204ENST00000453858 A0A1B0GW55 424 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 ZAR1LA6NP61 321 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 TMCO5BA8MYB1 307 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 POC1B-GALNT4F8VUJ3 575 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 H0YHG0 523 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 RNASEK-C17orf49H0YIS7 233 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 TNFSF11O14788 317 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 TNFRSF13BO14836 293 aaPredicted RBP4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 ERI3O43414 337 aaKnown RBP4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 CCNT2O60583 730 aaKnown RBP4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 FOXH1O75593 365 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 ANXA9O76027 345 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 IGHMP01871 453 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 IFNW1P05000 195 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 ITGA5P08648 1049 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 PABPC4LP0CB38 370 aaKnown RBP4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 DUX4L2P0CJ85 424 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 DUX4L3P0CJ86 424 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 DUX4L5P0CJ88 424 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 DUX4L6P0CJ89 424 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 DUX4L7P0CJ90 424 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 CD28P10747 220 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 NDUFB7P17568 137 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 TCN1P20061 433 aaPredicted RBP4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 NT5EP21589 574 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 GPX3P22352 226 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 RPS3P23396 243 aaKnown RBP eCLIP4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 CALCRP30988 508 aa4.32□□□□□ -1.72
SBDSP1-204ENST00000453858 RPL22P35268 128 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms