RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.68□□□□□ -0.38
TNFRSF1A-203ENST00000437813 EMC3Q9P0I2 261 aa12.68□□□□□ -0.38
TNFRSF1A-203ENST00000437813 ARFGEF3Q5TH69 2177 aa12.68□□□□□ -0.38
TNFRSF1A-203ENST00000437813 HEATR1Q9H583 2144 aaKnown RBP12.68□□□□□ -0.38
TNFRSF1A-203ENST00000437813 A0A1W2PP18 115 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 ZC3H12DA2A288 527 aaKnown RBP12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 CCDC154A6NI56 674 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 RNF223E7ERA6 249 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 ABCD4O14678 606 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 ZNF208O43345 1280 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 CRLF1O75462 422 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 IGHV3-9P01782 118 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 PGRP06401 933 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 S100A3P33764 101 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 IDH2P48735 452 aaKnown RBP12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 TXNL4AP83876 142 aaKnown RBP12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 SLC17A1Q14916 467 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 GABRA6Q16445 453 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 ZNF100Q8IYN0 542 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 ARFGAP2Q8N6H7 521 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 ZIC4Q8N9L1 334 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 WDR31Q8NA23 367 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 MAPK1IP1LQ8NDC0 245 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 PIGXQ8TBF5 258 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 PMM1Q92871 262 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 APH1AQ96BI3 265 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 TRMT61AQ96FX7 289 aaKnown RBP12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 BOD1Q96IK1 185 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 MAELQ96JY0 434 aaKnown RBP12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 CISD1Q9NZ45 108 aaKnown RBP12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 TMEM181Q9P2C4 612 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 GDF2Q9UK05 429 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 NOSIPQ9Y314 301 aaKnown RBP12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 CHST2Q9Y4C5 530 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 FLVCR1Q9Y5Y0 555 aa12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 SPIN1Q9Y657 262 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF1A-203ENST00000437813 TMED7-TICAM2A0A0A6YYA0 188 aa12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 TMEM72A0PK05 275 aa12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 E7EQL1 145 aa12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 GPR171O14626 319 aa12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 RAD51DO75771 328 aa12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 TFPIP10646 304 aa12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 IDUAP35475 653 aa12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 ACAA2P42765 397 aaKnown RBP12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 SLC1A3P43003 542 aa12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 HTR3AP46098 478 aa12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 SLC25A3Q00325 362 aa12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 SPOCK1Q08629 439 aa12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 FAPQ12884 760 aa12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 EPS8Q12929 822 aa12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 VEZF1Q14119 521 aa12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 STK11Q15831 433 aa12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 GPAT3Q53EU6 434 aa12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 MRPL2Q5T653 305 aaKnown RBP12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 B3GLCTQ6Y288 498 aa12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 MUCL1Q96DR8 90 aa12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 DNAJA3Q96EY1 480 aa12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 WDR55Q9H6Y2 383 aaPredicted RBP12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 MTHFD2LQ9H903 347 aaPredicted RBP12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 TAS2R16Q9NYV7 291 aa12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 B3GALT5Q9Y2C3 310 aa12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 TMED7Q9Y3B3 224 aa12.66□□□□□ -0.38
TNFRSF1A-203ENST00000437813 CDHR4A6H8M9 788 aa12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 HDAC3O15379 428 aa12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 CD40P25942 277 aa12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 EPHA3P29320 983 aa12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 TACR3P29371 465 aa12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 CHI3L1P36222 383 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 MAGEA8P43361 318 aa12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 P2RY4P51582 365 aa12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 POLR2HP52434 150 aaKnown RBP12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 MAP2K6P52564 334 aa12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 CDH11P55287 796 aa12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 NME5P56597 212 aa12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 IRX1P78414 480 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 CEP85LQ5SZL2 805 aa12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 PAQR6Q6TCH4 344 aa12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 MAVSQ7Z434 540 aa12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 SPATA19Q7Z5L4 167 aa12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 ZNF563Q8TA94 476 aa12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 RADILQ96JH8 1075 aa12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 OR52E6Q96RD3 313 aa12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 PANX1Q96RD7 426 aa12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 RSPO3Q9BXY4 272 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 SLC7A10Q9NS82 523 aa12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 ASB6Q9NWX5 421 aa12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 PRDM4Q9UKN5 801 aa12.65□□□□□ -0.38
TNFRSF1A-203ENST00000437813 LIPT2A6NK58 231 aa12.64□□□□□ -0.39
TNFRSF1A-203ENST00000437813 EIF1BO60739 113 aaKnown RBP12.64□□□□□ -0.39
TNFRSF1A-203ENST00000437813 FZD7O75084 574 aa12.64□□□□□ -0.39
TNFRSF1A-203ENST00000437813 NPIPB7O75200 414 aa12.64□□□□□ -0.39
TNFRSF1A-203ENST00000437813 GSNP06396 782 aa12.64□□□□□ -0.39
TNFRSF1A-203ENST00000437813 ZCCHC18P0CG32 403 aa12.64□□□□□ -0.39
TNFRSF1A-203ENST00000437813 HOXB9P17482 250 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF1A-203ENST00000437813 PTNP21246 168 aa12.64□□□□□ -0.39
TNFRSF1A-203ENST00000437813 PTAFRP25105 342 aa12.64□□□□□ -0.39
TNFRSF1A-203ENST00000437813 TTKP33981 857 aa12.64□□□□□ -0.39
TNFRSF1A-203ENST00000437813 LRRC74AQ0VAA2 488 aa12.64□□□□□ -0.39
TNFRSF1A-203ENST00000437813 C1orf162Q8NEQ5 155 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF1A-203ENST00000437813 OR10H5Q8NGA6 315 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms