RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 MMP28Q9H239 520 aa7.87□□□□□ -1.15
HSPG2-203ENST00000374695 SDR39U1Q9NRG7 319 aaPredicted RBP7.87□□□□□ -1.15
HSPG2-203ENST00000374695 POLHQ9Y253 713 aa7.87□□□□□ -1.15
HSPG2-203ENST00000374695 YTHDF2Q9Y5A9 579 aaKnown RBP7.87□□□□□ -1.15
HSPG2-203ENST00000374695 A0A1W2PPH5 198 aa7.87□□□□□ -1.15
HSPG2-203ENST00000374695 TBX18O95935 607 aa7.87□□□□□ -1.15
HSPG2-203ENST00000374695 RAB5AP20339 215 aa7.87□□□□□ -1.15
HSPG2-203ENST00000374695 GSK3AP49840 483 aa7.87□□□□□ -1.15
HSPG2-203ENST00000374695 TRA2BP62995 288 aaKnown RBP7.87□□□□□ -1.15
HSPG2-203ENST00000374695 FAM111BQ6SJ93 734 aa7.87□□□□□ -1.15
HSPG2-203ENST00000374695 WDR5BQ86VZ2 330 aa7.87□□□□□ -1.15
HSPG2-203ENST00000374695 ARHGAP39Q9C0H5 1083 aa7.87□□□□□ -1.15
HSPG2-203ENST00000374695 CACFD1Q9UGQ2 172 aa7.87□□□□□ -1.15
HSPG2-203ENST00000374695 INSL5Q9Y5Q6 135 aa7.87□□□□□ -1.15
HSPG2-203ENST00000374695 CD79AP11912 226 aa7.87□□□□□ -1.15
HSPG2-203ENST00000374695 DIO3P55073 304 aa7.87□□□□□ -1.15
HSPG2-203ENST00000374695 RAC1P63000 192 aa7.87□□□□□ -1.15
HSPG2-203ENST00000374695 LTBQ06643 244 aa7.87□□□□□ -1.15
HSPG2-203ENST00000374695 Q3ZCU0 254 aa7.87□□□□□ -1.15
HSPG2-203ENST00000374695 CTSL3PQ5NE16 218 aa7.87□□□□□ -1.15
HSPG2-203ENST00000374695 OR4K5Q8NGD3 323 aa7.87□□□□□ -1.15
HSPG2-203ENST00000374695 ST7LQ8TDW4 575 aa7.87□□□□□ -1.15
HSPG2-203ENST00000374695 RBM24Q9BX46 236 aaKnown RBP7.87□□□□□ -1.15
HSPG2-203ENST00000374695 SCPEP1Q9HB40 452 aa7.87□□□□□ -1.15
HSPG2-203ENST00000374695 GPR52Q9Y2T5 361 aa7.87□□□□□ -1.15
HSPG2-203ENST00000374695 ZNF791Q3KP31 576 aaPredicted RBP7.86□□□□□ -1.15
HSPG2-203ENST00000374695 LBX2Q6XYB7 198 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 COPS3Q9UNS2 423 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 HOXA1P49639 335 aaPredicted RBP7.86□□□□□ -1.15
HSPG2-203ENST00000374695 CAMK2BQ13554 666 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 OR14L1PQ8NHC6 308 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 DPH2Q9BQC3 489 aaPredicted RBP7.86□□□□□ -1.15
HSPG2-203ENST00000374695 SLC45A1Q9Y2W3 748 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 LEFTY1O75610 366 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 CRHBPP24387 322 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 RPS18P62269 152 aaKnown RBP7.86□□□□□ -1.15
HSPG2-203ENST00000374695 HBMQ6B0K9 141 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 ZNF322Q6U7Q0 402 aaPredicted RBP7.86□□□□□ -1.15
HSPG2-203ENST00000374695 LARP4Q71RC2 724 aaKnown RBP eCLIP7.86□□□□□ -1.156e-12■■□□□ 13
HSPG2-203ENST00000374695 MKXQ8IYA7 352 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 PXYLP1Q8TE99 480 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 THSD1Q9NS62 852 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 E7ESA3 106 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 RPL22L1Q6P5R6 122 aaKnown RBP7.86□□□□□ -1.15
HSPG2-203ENST00000374695 OR4A16Q8NH70 328 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 TMEM19Q96HH6 336 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 PLEK2Q9NYT0 353 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 PUS1Q9Y606 427 aaKnown RBP eCLIP7.86□□□□□ -1.15
HSPG2-203ENST00000374695 MAN2B1O00754 1011 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 ITGB2P05107 769 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 FAM217AQ8IXS0 508 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 PRR18Q8N4B5 295 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 NKAIN3Q8N8D7 197 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 OR1J2Q8NGS2 313 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 OR10K1Q8NGX5 313 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 GIMAP1Q8WWP7 306 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 FZD7O75084 574 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 ZNF133P52736 654 aaPredicted RBP7.86□□□□□ -1.15
HSPG2-203ENST00000374695 HTRA4P83105 476 aaPredicted RBP7.86□□□□□ -1.15
HSPG2-203ENST00000374695 MPPED2Q15777 294 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 UNC50Q53HI1 259 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 ZNF691Q5VV52 312 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 ENTHD1Q8IYW4 607 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 IL22RA1Q8N6P7 574 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 ZNF251Q9BRH9 671 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 JUNBP17275 347 aaPredicted RBP7.86□□□□□ -1.15
HSPG2-203ENST00000374695 DOC2AQ14183 400 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 UQCC3Q6UW78 93 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 DTX3Q8N9I9 347 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 MRGPRX2Q96LB1 330 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 SERINC2Q96SA4 455 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 TRAF3IP2O43734 574 aaPredicted RBP7.86□□□□□ -1.15
HSPG2-203ENST00000374695 MT-ND4P03905 459 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 HNF1BP35680 557 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 SNCAP37840 140 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 CSNK1A1P48729 337 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 MEF2AQ02078 507 aaPredicted RBP7.86□□□□□ -1.15
HSPG2-203ENST00000374695 CREB3L4Q8TEY5 395 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 CAPNS1P04632 268 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 FOLR1P15328 257 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 KLHDC8AQ8IYD2 350 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 OR11L1Q8NGX0 322 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 SLC6A20Q9NP91 592 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 COQ3Q9NZJ6 369 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 HRH3Q9Y5N1 445 aa7.86□□□□□ -1.15
HSPG2-203ENST00000374695 S1PR4O95977 384 aa7.85□□□□□ -1.15
HSPG2-203ENST00000374695 GGT5P36269 586 aa7.85□□□□□ -1.15
HSPG2-203ENST00000374695 RNLSQ5VYX0 342 aa7.85□□□□□ -1.15
HSPG2-203ENST00000374695 STEAP3Q658P3 488 aa7.85□□□□□ -1.15
HSPG2-203ENST00000374695 COMMD6Q7Z4G1 85 aa7.85□□□□□ -1.15
HSPG2-203ENST00000374695 LHX6Q9UPM6 363 aa7.85□□□□□ -1.15
HSPG2-203ENST00000374695 IGLV3-22A0A075B6J6 115 aa7.85□□□□□ -1.15
HSPG2-203ENST00000374695 ADH4P08319 380 aa7.85□□□□□ -1.15
HSPG2-203ENST00000374695 SSTR4P31391 388 aa7.85□□□□□ -1.15
HSPG2-203ENST00000374695 TMEM135Q86UB9 458 aa7.85□□□□□ -1.15
HSPG2-203ENST00000374695 CPOQ8IVL8 374 aa7.85□□□□□ -1.15
HSPG2-203ENST00000374695 TMEM151BQ8IW70 566 aa7.85□□□□□ -1.15
HSPG2-203ENST00000374695 MFSD6LQ8IWD5 586 aa7.85□□□□□ -1.15
HSPG2-203ENST00000374695 DMBX1Q8NFW5 382 aa7.85□□□□□ -1.15
HSPG2-203ENST00000374695 FOXJ1Q92949 421 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms