RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 HEXA-AS1Q9H8Q6 139 aa18.3■□□□□ 0.52
CRLF3-201ENST00000324238 KRCC1Q9NPI7 259 aaPredicted RBP18.3■□□□□ 0.52
CRLF3-201ENST00000324238 TRBV2A0A0J9YWF9 115 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 HRKO00198 91 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 GATBO75879 557 aaKnown RBP18.29■□□□□ 0.52
CRLF3-201ENST00000324238 RPP14O95059 124 aaKnown RBP18.29■□□□□ 0.52
CRLF3-201ENST00000324238 DNASE1P24855 282 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 RPS21P63220 83 aaKnown RBP18.29■□□□□ 0.52
CRLF3-201ENST00000324238 FAM53BQ14153 422 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 CEBPEQ15744 281 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 GSG1Q2KHT4 349 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 GARNL3Q5VVW2 1013 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 DMKNQ6E0U4 476 aaPredicted RBP18.29■□□□□ 0.52
CRLF3-201ENST00000324238 CMTM4Q8IZR5 234 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 SNX33Q8WV41 574 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 GAL3ST3Q96A11 431 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 MYADMQ96S97 322 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 ZNF350Q9GZX5 532 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 COPS3Q9UNS2 423 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 ZNF3P17036 446 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 GDNFP39905 211 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 VEGFCP49767 419 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 ZP1P60852 638 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 PPP1CAP62136 330 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 ZNF267Q14586 743 aaPredicted RBP18.29■□□□□ 0.52
CRLF3-201ENST00000324238 DEFB110Q30KQ9 67 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 LUZP2Q86TE4 346 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 MSANTD3Q96H12 275 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 MED30Q96HR3 178 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 NMNAT3Q96T66 252 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 SEC22CQ9BRL7 303 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 ST6GALNAC2Q9UJ37 374 aa18.29■□□□□ 0.52
CRLF3-201ENST00000324238 SEC16AO15027 2179 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 C5AR1P21730 350 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 EDNRAP25101 427 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 RPS15P62841 145 aaKnown RBP18.28■□□□□ 0.52
CRLF3-201ENST00000324238 WDR45BQ5MNZ6 344 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 KANSL1Q7Z3B3 1105 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 PXKQ7Z7A4 578 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 OR2T4Q8NH00 348 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 GPR137Q96N19 417 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 TSSK2Q96PF2 358 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 SEMA4CQ9C0C4 833 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 TRPV4Q9HBA0 871 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 MCCC2Q9HCC0 563 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 LYARQ9NX58 379 aaKnown RBP18.28■□□□□ 0.52
CRLF3-201ENST00000324238 GLTPQ9NZD2 209 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 PRSS38A1L453 326 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 C7orf66A4D0T2 115 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 MCIDASD6RGH6 385 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 FLRT2O43155 660 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 B3GALT2O43825 422 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 GMFGO60234 142 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 RAF1P04049 648 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 COL9A1P20849 921 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 PPM1FP49593 454 aaPredicted RBP18.28■□□□□ 0.52
CRLF3-201ENST00000324238 OR2A5Q96R48 311 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 TIMM29Q9BSF4 260 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 NOX4Q9NPH5 578 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 VPS13AQ96RL7 3174 aa18.28■□□□□ 0.52
CRLF3-201ENST00000324238 A0A1B0GTH9 108 aa18.27■□□□□ 0.52
CRLF3-201ENST00000324238 OR6C74A6NCV1 312 aa18.27■□□□□ 0.52
CRLF3-201ENST00000324238 RPL4P36578 427 aaKnown RBP18.27■□□□□ 0.52
CRLF3-201ENST00000324238 RPS27P42677 84 aaKnown RBP18.27■□□□□ 0.52
CRLF3-201ENST00000324238 CAMK2DQ13557 499 aa18.27■□□□□ 0.52
CRLF3-201ENST00000324238 EXOSC2Q13868 293 aaKnown RBP18.27■□□□□ 0.52
CRLF3-201ENST00000324238 CHMP1BQ7LBR1 199 aa18.27■□□□□ 0.52
CRLF3-201ENST00000324238 NR4A3Q92570 626 aa18.27■□□□□ 0.52
CRLF3-201ENST00000324238 ELF5Q9UKW6 265 aaPredicted RBP18.27■□□□□ 0.52
CRLF3-201ENST00000324238 SLC17A4Q9Y2C5 497 aa18.27■□□□□ 0.52
CRLF3-201ENST00000324238 SPEF1Q9Y4P9 236 aa18.27■□□□□ 0.52
CRLF3-201ENST00000324238 DBIP07108 87 aaKnown RBP18.27■□□□□ 0.52
CRLF3-201ENST00000324238 SLC2A5P22732 501 aa18.27■□□□□ 0.52
CRLF3-201ENST00000324238 ADPRHP54922 357 aa18.27■□□□□ 0.52
CRLF3-201ENST00000324238 NRG3P56975 720 aa18.27■□□□□ 0.52
CRLF3-201ENST00000324238 BDH1Q02338 343 aa18.27■□□□□ 0.52
CRLF3-201ENST00000324238 OC90Q02509 493 aaPredicted RBP18.27■□□□□ 0.52
CRLF3-201ENST00000324238 EIPR1Q53HC9 387 aa18.27■□□□□ 0.52
CRLF3-201ENST00000324238 TMEM196Q5HYL7 178 aa18.27■□□□□ 0.52
CRLF3-201ENST00000324238 KIAA1324Q6UXG2 1013 aaKnown RBP18.27■□□□□ 0.52
CRLF3-201ENST00000324238 GATSQ8NAP1 163 aa18.27■□□□□ 0.52
CRLF3-201ENST00000324238 RAB11FIP5Q9BXF6 653 aa18.27■□□□□ 0.52
CRLF3-201ENST00000324238 TSPAN10Q9H1Z9 355 aaPredicted RBP18.27■□□□□ 0.52
CRLF3-201ENST00000324238 NUBP2Q9Y5Y2 271 aa18.27■□□□□ 0.52
CRLF3-201ENST00000324238 HEATR5AQ86XA9 2040 aa18.27■□□□□ 0.52
CRLF3-201ENST00000324238 PTP4A3O75365 173 aa18.27■□□□□ 0.51
CRLF3-201ENST00000324238 TLX1P31314 330 aaPredicted RBP18.27■□□□□ 0.51
CRLF3-201ENST00000324238 SOX2P48431 317 aa18.27■□□□□ 0.51
CRLF3-201ENST00000324238 ALG10BQ5I7T1 473 aa18.27■□□□□ 0.51
CRLF3-201ENST00000324238 FCRLAQ7L513 359 aa18.27■□□□□ 0.51
CRLF3-201ENST00000324238 UBE2Q1Q7Z7E8 422 aa18.27■□□□□ 0.51
CRLF3-201ENST00000324238 DNAAF1Q8NEP3 725 aa18.27■□□□□ 0.51
CRLF3-201ENST00000324238 OR52I2Q8NH67 350 aa18.27■□□□□ 0.51
CRLF3-201ENST00000324238 RASD2Q96D21 266 aa18.27■□□□□ 0.51
CRLF3-201ENST00000324238 DDOQ99489 341 aa18.27■□□□□ 0.51
CRLF3-201ENST00000324238 TMEM27Q9HBJ8 222 aa18.27■□□□□ 0.51
CRLF3-201ENST00000324238 TDRD6O60522 2096 aaKnown RBP18.26■□□□□ 0.51
CRLF3-201ENST00000324238 SC5DO75845 299 aa18.26■□□□□ 0.51
CRLF3-201ENST00000324238 LSSP48449 732 aa18.26■□□□□ 0.51
CRLF3-201ENST00000324238 PGDP52209 483 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms