RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 NHLRC1Q6VVB1 395 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 DPPA4Q7L190 304 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 TSEN54Q7Z6J9 526 aaKnown RBP6.16□□□□□ -1.42
ZNF540-201ENST00000316433 FOXRED2Q8IWF2 684 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 ZNF619Q8N2I2 560 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 ARL14Q8N4G2 192 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 C10orf53Q8N6V4 93 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 OR13C4Q8NGS5 318 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 BBS10Q8TAM1 723 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 C16orf78Q8WTQ4 265 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 EEF1AKMT1Q8WVE0 214 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 ASB11Q8WXH4 323 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 PHYHIPQ92561 330 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 TM4SF18Q96CE8 201 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 TIFAQ96CG3 184 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 KLF16Q9BXK1 252 aaPredicted RBP6.16□□□□□ -1.42
ZNF540-201ENST00000316433 MFFQ9GZY8 342 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 IPPKQ9H8X2 491 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 CAPN10Q9HC96 672 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 SEMA4BQ9NPR2 832 aaPredicted RBP6.16□□□□□ -1.42
ZNF540-201ENST00000316433 UQCC1Q9NVA1 299 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 ZDHHC3Q9NYG2 299 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 MARCH2Q9P0N8 246 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 LUZP4Q9P127 313 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 GALPQ9UBC7 116 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 RPH3ALQ9UNE2 315 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 OR14I1A6ND48 311 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 MOSPD3O75425 235 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 SLCO2B1O94956 709 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 FARS2O95363 451 aaKnown RBP6.16□□□□□ -1.42
ZNF540-201ENST00000316433 ITGA5P08648 1049 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 METTL15P1P0C7V9 234 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 SDC1P18827 310 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 S1PR1P21453 382 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 AOAHP28039 575 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 NDUFS1P28331 727 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 GABRR2P28476 465 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 S100A3P33764 101 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 MNDAP41218 407 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 GLP1RP43220 463 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 RFX3P48380 749 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 TDGF1P3P51864 188 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 CRYBA2P53672 197 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 RAB8AP61006 207 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 SELENOWP63302 87 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 SRSF3P84103 164 aaKnown RBP6.16□□□□□ -1.42
ZNF540-201ENST00000316433 SHC2P98077 582 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 DDX39BQ13838 428 aaKnown RBP6.16□□□□□ -1.42
ZNF540-201ENST00000316433 PTGR1Q14914 329 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 ZNF805Q5CZA5 627 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 TMEM244Q5VVB8 128 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 PSAPL1Q6NUJ1 521 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 IL27RAQ6UWB1 636 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 LANCL3Q6ZV70 420 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 LAPTM4BQ86VI4 370 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 ANGPTL5Q86XS5 388 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 SPNS2Q8IVW8 549 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 DBF4BQ8NFT6 615 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 OR52B6Q8NGF0 335 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 OR5M3Q8NGP4 307 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 OR5R1Q8NH85 324 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 RNASE8Q8TDE3 154 aaKnown RBP6.16□□□□□ -1.42
ZNF540-201ENST00000316433 DUSP19Q8WTR2 217 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 FEVQ99581 238 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 MRI1Q9BV20 369 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 CFHR5Q9BXR6 569 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 SLC6A16Q9GZN6 736 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 HMX1Q9NP08 348 aaPredicted RBP6.16□□□□□ -1.42
ZNF540-201ENST00000316433 ACKR4Q9NPB9 350 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 MYNNQ9NPC7 610 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 ZNF69Q9UC07 566 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 IL17BQ9UHF5 180 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 OPN4Q9UHM6 478 aa6.16□□□□□ -1.42
ZNF540-201ENST00000316433 hCG_1809904A0A1W2PP81 198 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 A0A1W2PR64 198 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 A0A1W2PRV1 198 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 TMEM129A0AVI4 362 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 TBC1D3FA6NER0 549 aaPredicted RBP6.15□□□□□ -1.42
ZNF540-201ENST00000316433 NUDT19A8MXV4 375 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 SOD1P00441 154 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 IFNA17P01571 189 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 TRBC1P01850 177 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 MT-ND4P03905 459 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 ANXA5P08758 320 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 EPXP11678 715 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 STAT5AP42229 794 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 MAGEB1P43366 347 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 HTR6P50406 440 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 RABGGTBP53611 331 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 STXBP1P61764 594 aaKnown RBP6.15□□□□□ -1.42
ZNF540-201ENST00000316433 FAM174BQ3ZCQ3 159 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 SLC39A12Q504Y0 691 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 SLC22A10Q63ZE4 541 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 C17orf99Q6UX52 265 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 PTCHD4Q6ZW05 846 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 PEG10Q86TG7 708 aaKnown RBP6.15□□□□□ -1.42
ZNF540-201ENST00000316433 THNSL2Q86YJ6 484 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 PIANPQ8IYJ0 282 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 RGL4Q8IZJ4 473 aa6.15□□□□□ -1.42
ZNF540-201ENST00000316433 NXPE1Q8N323 547 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms