RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 UXS1Q8NBZ7 420 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 OR4K14Q8NGD5 310 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 SMIM4Q8WVI0 70 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 CNOT9Q92600 299 aaKnown RBP16.56■□□□□ 0.24
TRAF4-201ENST00000262395 GSX2Q9BZM3 304 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 ADAM18Q9Y3Q7 739 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 TBC1D3KA0A087X1G2 549 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 TBC1D3FA6NER0 549 aaPredicted RBP16.56■□□□□ 0.24
TRAF4-201ENST00000262395 RNGTTO60942 597 aaKnown RBP16.56■□□□□ 0.24
TRAF4-201ENST00000262395 ADAM11O75078 769 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 NGFRP08138 427 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 CXCL2P19875 107 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 TAS2R43P59537 309 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 RPS11P62280 158 aaKnown RBP eCLIP16.56■□□□□ 0.24
TRAF4-201ENST00000262395 RPS15P62841 145 aaKnown RBP16.56■□□□□ 0.24
TRAF4-201ENST00000262395 DUSP8Q13202 625 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 BTN1A1Q13410 526 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 RUNX2Q13950 521 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 TBC1D3GQ6DHY5 549 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 FGD2Q7Z6J4 655 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 LINC00052Q96N35 136 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 MS4A7Q9GZW8 240 aaPredicted RBP16.56■□□□□ 0.24
TRAF4-201ENST00000262395 ZNF346Q9UL40 294 aaKnown RBP16.56■□□□□ 0.24
TRAF4-201ENST00000262395 A0A1B0GVT2 93 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 CARNS1A5YM72 827 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 HIST1H1CP16403 213 aaKnown RBP16.56■□□□□ 0.24
TRAF4-201ENST00000262395 TRAM1Q15629 374 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 HSD17B12Q53GQ0 312 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 SLC22A10Q63ZE4 541 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 PRSS41Q7RTY9 318 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 MRPL43Q8N983 215 aaKnown RBP16.56■□□□□ 0.24
TRAF4-201ENST00000262395 OR52B4Q8NGK2 314 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 CXorf58Q96LI9 332 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 SLC27A6Q9Y2P4 619 aa16.56■□□□□ 0.24
TRAF4-201ENST00000262395 KNL1Q8NG31 2342 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 A0A1W2PP55 124 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 C1QTNF3-AMACRE9PGA6 284 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 SELENOFO60613 162 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 SIX6O95475 246 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 EML2O95834 649 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 ACSM4P0C7M7 580 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 PSMB1P20618 241 aaKnown RBP16.55■□□□□ 0.24
TRAF4-201ENST00000262395 PLAURQ03405 335 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 CDK5R1Q15078 307 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 EIPR1Q53HC9 387 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 RD3Q7Z3Z2 195 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 ZNF619Q8N2I2 560 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 MOSPD2Q8NHP6 518 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 MARVELD3Q96A59 401 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 ABRACLQ9P1F3 81 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 PCDHGA9Q9Y5G4 932 aaKnown RBP16.55■□□□□ 0.24
TRAF4-201ENST00000262395 REV3LO60673 3130 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 LGALS8O00214 317 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 PRICKLE3O43900 615 aaPredicted RBP16.55■□□□□ 0.24
TRAF4-201ENST00000262395 STX11O75558 287 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 CMPK1P30085 196 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 UBE2MP61081 183 aaKnown RBP16.55■□□□□ 0.24
TRAF4-201ENST00000262395 SIRPAP78324 504 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 RPE65Q16518 533 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 HACD4Q5VWC8 232 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 FAM122CQ6P4D5 195 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 ALKAL2Q6UX46 152 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 HDDC3Q8N4P3 179 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 MFSD9Q8NBP5 474 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 OR6K6Q8NGW6 343 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 COQ8AQ8NI60 647 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 GFI1Q99684 422 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 INPP5EQ9NRR6 644 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 COPS3Q9UNS2 423 aa16.55■□□□□ 0.24
TRAF4-201ENST00000262395 C4orf47A7E2U8 309 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 P2RX6O15547 441 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 ICAM2P13598 275 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 NID1P14543 1247 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 UGT2B7P16662 529 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 DCTDP32321 178 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 GBX2P52951 348 aaPredicted RBP16.54■□□□□ 0.24
TRAF4-201ENST00000262395 KIAA1024LP59773 190 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 OR5M10Q6IEU7 315 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 KIAA1324Q6UXG2 1013 aaKnown RBP16.54■□□□□ 0.24
TRAF4-201ENST00000262395 OR2L13Q8N349 312 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 ZBTB44Q8NCP5 570 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 SMIM19Q96E16 107 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 ANKRD10Q9NXR5 420 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 FLRT3Q9NZU0 649 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 TBX21Q9UL17 535 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 IER3IP1Q9Y5U9 82 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 TBC1D3EA0A087X179 549 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 KHNYNO15037 678 aaKnown RBP16.54■□□□□ 0.24
TRAF4-201ENST00000262395 PIN1P1O15428 100 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 LINC00271P0C7V0 271 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 IL32P24001 234 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 GABRA3P34903 492 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 CEBPEQ15744 281 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 GAB4Q2WGN9 574 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 SLITRK4Q8IW52 837 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 ZPLD1Q8TCW7 415 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 TEX101Q9BY14 249 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 NOX3Q9HBY0 568 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 PTTG3PQ9NZH4 202 aa16.54■□□□□ 0.24
TRAF4-201ENST00000262395 STON1Q9Y6Q2 735 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms