RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 CPXM2Q8N436 756 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 RSPO3Q9BXY4 272 aaPredicted RBP14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 ZNF350Q9GZX5 532 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 SIDT1Q9NXL6 827 aaKnown RBP14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 ZNF346Q9UL40 294 aaKnown RBP14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 LHX6Q9UPM6 363 aa14.75□□□□□ -0.05
PRPF40B-201ENST00000261897 IFNGP01579 166 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 PCCBP05166 539 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 ADAM8P78325 824 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 BTN3A2P78410 334 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 TMEM44Q2T9K0 475 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 AADACL4Q5VUY2 407 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 ZNF620Q6ZNG0 422 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 RANBP3LQ86VV4 465 aaPredicted RBP14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 TMEFF1Q8IYR6 380 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 OR56A3Q8NH54 315 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 TCEAL3Q969E4 200 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 SLC25A28Q96A46 364 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 OR7D2Q96RA2 312 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 VRK1Q99986 396 aaPredicted RBP14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 ATG5Q9H1Y0 275 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 MEPEQ9NQ76 525 aaPredicted RBP14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 A0A0B4J2A0 478 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 PRAF2O60831 178 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 DUSP11O75319 330 aaKnown RBP14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 LRG1P02750 347 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 SLC35G4P0C7Q5 338 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 SPP1P10451 314 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 IFNGR1P15260 489 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 MEOX2P50222 304 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 B2MP61769 119 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 PON3Q15166 354 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 TMPRSS9Q7Z410 1059 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 FAM220AQ7Z4H9 259 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 CDH26Q8IXH8 852 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 OR6V1Q8N148 313 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 SMIM4Q8WVI0 70 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 MARVELD3Q96A59 401 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 PEX11GQ96HA9 241 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 SHPKQ9UHJ6 478 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 RPH3AQ9Y2J0 694 aaPredicted RBP14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 FAM96BQ9Y3D0 163 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 DOCK1Q14185 1865 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 PLXNA1Q9UIW2 1896 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 GIPP09681 153 aaPredicted RBP14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 OR8G3PP0DMU2 310 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 PCSK2P16519 638 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 AKR1C4P17516 323 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 WASP42768 502 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 MANEAQ5SRI9 462 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 METTL3Q86U44 580 aaKnown RBP14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 MUC20Q8N307 709 aaPredicted RBP14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 C2orf69Q8N8R5 385 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 MORN4Q8NDC4 146 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 TIFAQ96CG3 184 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 HS6ST2Q96MM7 605 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 TNFRSF13CQ96RJ3 184 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 CHST6Q9GZX3 395 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 KCNK6Q9Y257 313 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 RLFQ13129 1914 aa14.74□□□□□ -0.05
PRPF40B-201ENST00000261897 TVP23AA6NH52 213 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 DCNP07585 359 aaKnown RBP14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 MAKP20794 623 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 NT5EP21589 574 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 ELAVL2Q12926 359 aaKnown RBP14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 GPNMBQ14956 572 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 NIPAL3Q6P499 406 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 THSD4Q6ZMP0 1018 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 OR1S2Q8NGQ3 325 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 THEM6Q8WUY1 208 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 HGDQ93099 445 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 MRPS24Q96EL2 167 aaKnown RBP14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 PTCHD1Q96NR3 888 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 AMDHD1Q96NU7 426 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 SLC6A7Q99884 636 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 KLF16Q9BXK1 252 aaPredicted RBP14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 MED31Q9Y3C7 131 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 ANKRD36A6QL64 1941 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 A0A1B0GTH9 108 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 PTP4A3O75365 173 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 ZNF432O94892 652 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 SLCO2B1O94956 709 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 SBK2P0C263 348 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 NFYBP25208 207 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 MMP15P51511 669 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 ZNF157P51786 506 aaPredicted RBP14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 FOXK2Q01167 660 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 AIMP2Q13155 320 aaKnown RBP14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 GAS6Q14393 721 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 FAM69AQ5T7M9 428 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 GATSQ8NAP1 163 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 GSKIPQ9P0R6 139 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 ATG4BQ9Y4P1 393 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 IER3IP1Q9Y5U9 82 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 TBC1D3DA0A087WVF3 549 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 TBC1D3IA0A087WXS9 549 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 TBC1D3EA0A087X179 549 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 TBC1D3KA0A087X1G2 549 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 TBC1D3BA6NDS4 549 aa14.73□□□□□ -0.05
PRPF40B-201ENST00000261897 TBC1D3FA6NER0 549 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms