RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 PRKCDQ05655 676 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 SPEM2Q0P670 501 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 TBCEQ15813 527 aaPredicted RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 SSX1Q16384 188 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 UBE2UQ5VVX9 321 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 ZNF613Q6PF04 617 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 CD300LDQ6UXZ3 194 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 PLEKHG7Q6ZR37 379 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 RABEPKQ7Z6M1 372 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 CYP4Z2PQ8N1L4 340 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 SLC15A4Q8N697 577 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 SIRT6Q8N6T7 355 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 FAM181AQ8N9Y4 354 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 ZNF527Q8NB42 609 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 SLC37A3Q8NCC5 494 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 OR6K6Q8NGW6 343 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 TBC1D15Q8TC07 691 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 GPR119Q8TDV5 335 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 ZNRF4Q8WWF5 429 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 TRUB1Q8WWH5 349 aaKnown RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 SLC39A7Q92504 469 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 HOXB13Q92826 284 aaPredicted RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 SGTBQ96EQ0 304 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 C1GALT1C1Q96EU7 318 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 TRMT61AQ96FX7 289 aaKnown RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 NMNAT3Q96T66 252 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 SPSB2Q99619 263 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 DOK1Q99704 481 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 KCNS3Q9BQ31 491 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 PELOQ9BRX2 385 aaKnown RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 TEX12Q9BXU0 123 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 CHRNA10Q9GZZ6 450 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 ISG20L2Q9H9L3 353 aaKnown RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 MCCC2Q9HCC0 563 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 SRA1Q9HD15 236 aaKnown RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 KRCC1Q9NPI7 259 aaPredicted RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 FKBP14Q9NWM8 211 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 SEMA5BQ9P283 1151 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 HRH3Q9Y5N1 445 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 CORINQ9Y5Q5 1042 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 NPFFR2Q9Y5X5 522 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 CFAP47Q6ZTR5 3102 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 GVINP1Q7Z2Y8 2422 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 FAM186AA6NE01 2351 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 PCNX2A6NKB5 2137 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 A0A087WUJ7 227 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 BLACEA4D250 179 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 C12orf71A8MTZ7 269 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 PRR23D1E9PI22 279 aaPredicted RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 H3BML4 177 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 BHLHE40O14503 412 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 DVL2O14641 736 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 HCN1O60741 890 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 GPX5O75715 221 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 GABARAPO95166 117 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 RCBTB2O95199 551 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 RAB36O95755 333 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 GPANK1O95872 356 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 TSPAN19P0C672 248 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 PRR23D2P0DMB1 279 aaPredicted RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 PEPDP12955 493 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 PNLIPP16233 465 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 CELP19835 753 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 PAICSP22234 425 aaKnown RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 CXCR1P25024 350 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 ACVR2AP27037 513 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 OTX2P32243 289 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 OPRL1P41146 370 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 GRK6P43250 576 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 CENPAP49450 140 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 GPR143P51810 404 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 EMP3P54852 163 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 PSMD4P55036 377 aaKnown RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 CAV3P56539 151 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 LTBQ06643 244 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 SKP2Q13309 424 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 ITGADQ13349 1161 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 SNTA1Q13424 505 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 OCLNQ16625 522 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.14□□□□□ -1.91
LIG4-205ENST00000614526 ZNF362Q5T0B9 420 aaPredicted RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 AADACL4Q5VUY2 407 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 ARSKQ6UWY0 536 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 DHRS13Q6UX07 377 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 IL20RBQ6UXL0 311 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 SLC46A3Q7Z3Q1 461 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 CPEB2Q7Z5Q1 589 aaKnown RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 KLBQ86Z14 1044 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 RFLNBQ8N5W9 214 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 TMEM99Q8N816 258 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 SYT14Q8NB59 555 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 ZBTB44Q8NCP5 570 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 B4GALNT2Q8NHY0 566 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 TM9SF4Q92544 642 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 Q96M85 177 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 ZNF578Q96N58 590 aaPredicted RBP3.14□□□□□ -1.91
LIG4-205ENST00000614526 OPALINQ96PE5 141 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 IER2Q9BTL4 223 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 KATNB1Q9BVA0 655 aa3.14□□□□□ -1.91
LIG4-205ENST00000614526 TMED9Q9BVK6 235 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms