RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 EIF1AXP47813 144 aaKnown RBP11.94□□□□□ -0.5
CTSA-213ENST00000606782 SLC6A8P48029 635 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 SLC7A2P52569 658 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 ATP12AP54707 1039 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 CDK6Q00534 326 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 CHRNEQ04844 493 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 FOXD4Q12950 439 aaPredicted RBP11.94□□□□□ -0.5
CTSA-213ENST00000606782 GNA13Q14344 377 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 ZNF141Q15928 474 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 GPAT3Q53EU6 434 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 FRRS1Q6ZNA5 592 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 OLIG3Q7RTU3 272 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 CXorf67Q86X51 503 aaPredicted RBP11.94□□□□□ -0.5
CTSA-213ENST00000606782 GATSQ8NAP1 163 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 OR6K3Q8NGY3 331 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 OR2V1Q8NHB1 315 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 MAL2Q969L2 176 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 SLC7A6OSQ96CW6 309 aaPredicted RBP11.94□□□□□ -0.5
CTSA-213ENST00000606782 REXO5Q96IC2 774 aaKnown RBP11.94□□□□□ -0.5
CTSA-213ENST00000606782 RNF145Q96MT1 663 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 CDRT15Q96T59 188 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 SLC38A1Q9H2H9 487 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 CD300AQ9UGN4 299 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 KCNE5Q9UJ90 142 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 MKLN1Q9UL63 735 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 ICAM5Q9UMF0 924 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 PROCRQ9UNN8 238 aa11.94□□□□□ -0.5
CTSA-213ENST00000606782 A0A0J9YW62 118 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 TMEM247A6NEH6 219 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 ETV2O00321 342 aaPredicted RBP11.93□□□□□ -0.5
CTSA-213ENST00000606782 EBAG9O00559 213 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 EFNA2O43921 213 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 GMFGO60234 142 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 GCM2O75603 506 aaPredicted RBP11.93□□□□□ -0.5
CTSA-213ENST00000606782 PGM3O95394 542 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 ATP6V1C1P21283 382 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 LOXP28300 417 aaPredicted RBP11.93□□□□□ -0.5
CTSA-213ENST00000606782 ELK4P28324 431 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 ZNF41P51814 821 aaPredicted RBP11.93□□□□□ -0.5
CTSA-213ENST00000606782 CRISP3P54108 245 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 SUMO3P55854 103 aaPredicted RBP11.93□□□□□ -0.5
CTSA-213ENST00000606782 SIRPAP78324 504 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 ZNF117Q03924 483 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 LIPEQ05469 1076 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 POU4F3Q15319 338 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 VMACQ2NL98 169 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 SPATS1Q496A3 300 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 REEP3Q6NUK4 255 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 C22orf34Q6ZV56 151 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 DEFB107AQ8IZN7 70 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 ZNF619Q8N2I2 560 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 C11orf65Q8NCR3 313 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 OIT3Q8WWZ8 545 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 TMEM19Q96HH6 336 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 PIP5K1AQ99755 562 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 MED18Q9BUE0 208 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 SPAG4Q9NPE6 437 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 KLHL28Q9NXS3 571 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 CALML5Q9NZT1 146 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 MCTS1Q9ULC4 181 aaKnown RBP11.93□□□□□ -0.5
CTSA-213ENST00000606782 EMC9Q9Y3B6 208 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 WDR45Q9Y484 360 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 PRR14LQ5THK1 2151 aa11.93□□□□□ -0.5
CTSA-213ENST00000606782 DSPPQ9NZW4 1301 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 FAM220BPB1ANY3 271 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 CXCL13O43927 109 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 KIAA0513O60268 411 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 DNAJA2O60884 412 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 UGT2B17O75795 530 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 NTN1O95631 604 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 BCHEP06276 602 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 ETS2P15036 469 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 PPP3CBP16298 524 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 ME2P23368 584 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 P2RX1P51575 399 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 MXRA7P84157 204 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 GABPB1Q06547 395 aaPredicted RBP11.92□□□□□ -0.5
CTSA-213ENST00000606782 SCARB2Q14108 478 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 VEZF1Q14119 521 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 GPR68Q15743 365 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 MAPK14Q16539 360 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 CYP51A1Q16850 503 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 SLC25A53Q5H9E4 307 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 PDSS1Q5T2R2 415 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 HBMQ6B0K9 141 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 GTF2IRD2BQ6EKJ0 949 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 ERICH5Q6P6B1 374 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 CBLN3Q6UW01 205 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 CCDC80Q76M96 950 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 GTF2IRD2Q86UP8 949 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 KRTAP1-3Q8IUG1 177 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 SLC30A8Q8IWU4 369 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 LILRA2Q8N149 483 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 ZNF527Q8NB42 609 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 HIPK4Q8NE63 616 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 NFKBIDQ8NI38 313 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 GPR119Q8TDV5 335 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 OSTF1Q92882 214 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 ARSGQ96EG1 525 aa11.92□□□□□ -0.5
CTSA-213ENST00000606782 SH3YL1Q96HL8 342 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms