RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 TFPIP10646 304 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 SLC25A16P16260 332 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 UQCRC2P22695 453 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 PGM1P36871 562 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 MAGEA8P43361 318 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 NUDT6P53370 316 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 TGFBR3Q03167 851 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 DPY19L1Q2PZI1 675 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 ELOA3BQ3SY89 546 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 CLEC2AQ6UVW9 174 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 GSPT2Q8IYD1 628 aaKnown RBP15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 C17orf78Q8N4C9 275 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 FAM71CQ8NEG0 241 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 ELOA3Q8NG57 546 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 OR5AK3PQ8NH89 298 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 OR2W6PQ8NHA6 318 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 AGR3Q8TD06 166 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 TMEM158Q8WZ71 300 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 CCDC106Q9BWC9 280 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 TMEM160Q9NX00 188 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 MALT1Q9UDY8 824 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 CDC42EP3Q9UKI2 254 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 POU2F3Q9UKI9 436 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 MKLN1Q9UL63 735 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 WDR45Q9Y484 360 aa15.71■□□□□ 0.11
SHKBP1-227ENST00000602011 CCT8L1PA6NM43 557 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 ZNF716A6NP11 495 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 C9JVG2 144 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 SSX4O60224 188 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 KIAA0513O60268 411 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 BPGMP07738 259 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 CSF3P09919 207 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 CD40P25942 277 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 CHRNB3Q05901 458 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 LOXL1Q08397 574 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 IFFO1Q0D2I5 559 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 SLC22A25Q6T423 547 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 ATG4DQ86TL0 474 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 CMIPQ8IY22 773 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 PIAS4Q8N2W9 510 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 MUC15Q8N387 334 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 C1orf162Q8NEQ5 155 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 XAGE5Q8WWM1 108 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 ZNF775Q96BV0 537 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 ZNF524Q96C55 264 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 NAA11Q9BSU3 229 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 MECRQ9BV79 373 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 QRSL1Q9H0R6 528 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 PIF1Q9H611 641 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 FKRPQ9H9S5 495 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 TMEM181Q9P2C4 612 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 SLC17A7Q9P2U7 560 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 GIMAP2Q9UG22 337 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 KCNE5Q9UJ90 142 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 SLC25A15Q9Y619 301 aa15.7■□□□□ 0.1
SHKBP1-227ENST00000602011 H7C417 338 aa15.69■□□□□ 0.1
SHKBP1-227ENST00000602011 ZNF208O43345 1280 aa15.69■□□□□ 0.1
SHKBP1-227ENST00000602011 ANXA11P50995 505 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-227ENST00000602011 SLC35A1P78382 337 aa15.69■□□□□ 0.1
SHKBP1-227ENST00000602011 KCNJ10P78508 379 aa15.69■□□□□ 0.1
SHKBP1-227ENST00000602011 H3F3AP84243 136 aa15.69■□□□□ 0.1
SHKBP1-227ENST00000602011 GNA13Q14344 377 aa15.69■□□□□ 0.1
SHKBP1-227ENST00000602011 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-227ENST00000602011 NUDCD3Q8IVD9 361 aa15.69■□□□□ 0.1
SHKBP1-227ENST00000602011 ARFGAP2Q8N6H7 521 aa15.69■□□□□ 0.1
SHKBP1-227ENST00000602011 OR4A15Q8NGL6 344 aa15.69■□□□□ 0.1
SHKBP1-227ENST00000602011 PROX1Q92786 737 aa15.69■□□□□ 0.1
SHKBP1-227ENST00000602011 TESCQ96BS2 214 aa15.69■□□□□ 0.1
SHKBP1-227ENST00000602011 TNFRSF13CQ96RJ3 184 aa15.69■□□□□ 0.1
SHKBP1-227ENST00000602011 INPP5KQ9BT40 448 aa15.69■□□□□ 0.1
SHKBP1-227ENST00000602011 DPY30Q9C005 99 aa15.69■□□□□ 0.1
SHKBP1-227ENST00000602011 OR51I1Q9H343 314 aa15.69■□□□□ 0.1
SHKBP1-227ENST00000602011 LPAR3Q9UBY5 353 aa15.69■□□□□ 0.1
SHKBP1-227ENST00000602011 DCTN4Q9UJW0 460 aa15.69■□□□□ 0.1
SHKBP1-227ENST00000602011 GDF2Q9UK05 429 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-227ENST00000602011 PMF1-BGLAPU3KQ54 211 aa15.69■□□□□ 0.1
SHKBP1-227ENST00000602011 ALPK2Q86TB3 2170 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 E7EQL1 145 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 NDUFS7O75251 213 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 SKAP2O75563 359 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 MYZAPP0CAP1 466 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 FAM157CP0CG43 387 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 UQCRBP14927 111 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 THBS2P35442 1172 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 RNF144AP50876 292 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 FABP6P51161 128 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 CLNS1AP54105 237 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 RPS26P62854 115 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 HPCAP84074 193 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 LRRC74AQ0VAA2 488 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 GABRA6Q16445 453 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 OR4F3Q6IEY1 312 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 TYW3Q6IPR3 259 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 C11orf71Q6IPW1 123 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 ZCCHC23Q6ZST2 131 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 ADGRG3Q86Y34 549 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 ROPN1LQ96C74 230 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 DDIT4LQ96D03 193 aa15.68■□□□□ 0.1
SHKBP1-227ENST00000602011 CACNG6Q9BXT2 260 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms