RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 SAGP10523 405 aaPredicted RBP18.88■□□□□ 0.61
PNKP-203ENST00000593946 PRKCAP17252 672 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 FXYD6P3P58550 94 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 INPP5JQ15735 1006 aaPredicted RBP18.88■□□□□ 0.61
PNKP-203ENST00000593946 MDGA2Q7Z553 956 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 IQCF1Q8N6M8 205 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 OR2M3Q8NG83 312 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 RHOXF1Q8NHV9 184 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 SGTBQ96EQ0 304 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 RASSF1Q9NS23 344 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 IMPAD1Q9NX62 359 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 ZNF226Q9NYT6 803 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 STMN3Q9NZ72 180 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 AASSQ9UDR5 926 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 SCOCQ9UIL1 159 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 SIGLEC7Q9Y286 467 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 GABRB1P18505 474 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 WT1P19544 449 aaPredicted RBP18.88■□□□□ 0.61
PNKP-203ENST00000593946 CXCR1P25024 350 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 HTR3AP46098 478 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 BLMHQ13867 455 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 GINS1Q14691 196 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 RBM48Q5RL73 367 aaKnown RBP18.88■□□□□ 0.61
PNKP-203ENST00000593946 ABHD17BQ5VST6 288 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 SLC27A4Q6P1M0 643 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 ARSKQ6UWY0 536 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 ZNF227Q86WZ6 799 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 OR13C2Q8NGS9 318 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 FANK1Q8TC84 345 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 APH1BQ8WW43 257 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 MED17Q9NVC6 651 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 ANKRD10Q9NXR5 420 aa18.88■□□□□ 0.61
PNKP-203ENST00000593946 TMED7-TICAM2A0A0A6YYA0 188 aa18.87■□□□□ 0.61
PNKP-203ENST00000593946 WBP4O75554 376 aaKnown RBP18.87■□□□□ 0.61
PNKP-203ENST00000593946 SMIM18P0DKX4 95 aa18.87■□□□□ 0.61
PNKP-203ENST00000593946 CYB561P49447 251 aa18.87■□□□□ 0.61
PNKP-203ENST00000593946 SMSP52788 366 aa18.87■□□□□ 0.61
PNKP-203ENST00000593946 RRADP55042 308 aa18.87■□□□□ 0.61
PNKP-203ENST00000593946 FOXC1Q12948 553 aa18.87■□□□□ 0.61
PNKP-203ENST00000593946 FHL1Q13642 323 aa18.87■□□□□ 0.61
PNKP-203ENST00000593946 ACSM5Q6NUN0 579 aa18.87■□□□□ 0.61
PNKP-203ENST00000593946 TMEM154Q6P9G4 183 aa18.87■□□□□ 0.61
PNKP-203ENST00000593946 SLC46A3Q7Z3Q1 461 aa18.87■□□□□ 0.61
PNKP-203ENST00000593946 ADGRG3Q86Y34 549 aa18.87■□□□□ 0.61
PNKP-203ENST00000593946 ZNF566Q969W8 418 aa18.87■□□□□ 0.61
PNKP-203ENST00000593946 OR52D1Q9H346 318 aa18.87■□□□□ 0.61
PNKP-203ENST00000593946 TBC1D23Q9NUY8 699 aa18.87■□□□□ 0.61
PNKP-203ENST00000593946 FBXL2Q9UKC9 423 aa18.87■□□□□ 0.61
PNKP-203ENST00000593946 TMED7Q9Y3B3 224 aa18.87■□□□□ 0.61
PNKP-203ENST00000593946 M0R129 80 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 NKX2-8O15522 239 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 PTP4A3O75365 173 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 CRHBPP24387 322 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 ZNF41P51814 821 aaPredicted RBP18.86■□□□□ 0.61
PNKP-203ENST00000593946 SOX8P57073 446 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 PLPPR5Q32ZL2 321 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 CRTC2Q53ET0 693 aaPredicted RBP18.86■□□□□ 0.61
PNKP-203ENST00000593946 SLC25A53Q5H9E4 307 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 RPL13AP3Q6NVV1 102 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 OAFQ86UD1 273 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 PLCZ1Q86YW0 608 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 CCDC103Q8IW40 242 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 GALNT16Q8N428 558 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 NPAS1Q99742 590 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 TSSK6Q9BXA6 273 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 ADNPQ9H2P0 1102 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 VDAC3Q9Y277 283 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 FREM3P0C091 2139 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 TRAV27A0A087WT01 109 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 ARGFXA6NJG6 315 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 SLC1A7O00341 560 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 SNPHO15079 494 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 HCN1O60741 890 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 SMNDC1O75940 238 aaKnown RBP eCLIP18.86■□□□□ 0.61
PNKP-203ENST00000593946 OR7A10O76100 309 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 RCBTB2O95199 551 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 SNX4O95219 450 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 PRKAR1AP10644 381 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 SLC9A3P48764 834 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 CXCR4P61073 352 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 TEKQ02763 1124 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 CLEC12AQ5QGZ9 265 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 POMZP3Q6PJE2 187 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 CASP12Q6UXS9 341 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 PSD4Q8NDX1 1056 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 OR4K17Q8NGC6 315 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 LIPHQ8WWY8 451 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 C1GALT1C1Q96EU7 318 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 SAMD8Q96LT4 415 aa18.86■□□□□ 0.61
PNKP-203ENST00000593946 LRRN3E7EW58 273 aa18.85■□□□□ 0.61
PNKP-203ENST00000593946 SUSD5O60279 629 aa18.85■□□□□ 0.61
PNKP-203ENST00000593946 MPZL2O60487 215 aa18.85■□□□□ 0.61
PNKP-203ENST00000593946 NPIPB7O75200 414 aa18.85■□□□□ 0.61
PNKP-203ENST00000593946 CH25HO95992 272 aa18.85■□□□□ 0.61
PNKP-203ENST00000593946 P04436 131 aa18.85■□□□□ 0.61
PNKP-203ENST00000593946 CCDC159P0C7I6 412 aa18.85■□□□□ 0.61
PNKP-203ENST00000593946 CCNA2P20248 432 aa18.85■□□□□ 0.61
PNKP-203ENST00000593946 FMO3P31513 532 aa18.85■□□□□ 0.61
PNKP-203ENST00000593946 APOBEC1P41238 236 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms