RNA–Protein interactions for RNA: ENST00000588749.1

CACTIN-206, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 3

Gene CACTIN, Length 391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-206ENST00000588749 TROVE2P10155 538 aaKnown RBP eCLIP12.91□□□□□ -0.34
CACTIN-206ENST00000588749 TACR3P29371 465 aa12.91□□□□□ -0.34
CACTIN-206ENST00000588749 SLC1A3P43003 542 aa12.91□□□□□ -0.34
CACTIN-206ENST00000588749 HTR3AP46098 478 aa12.91□□□□□ -0.34
CACTIN-206ENST00000588749 POLR2HP52434 150 aaKnown RBP12.91□□□□□ -0.34
CACTIN-206ENST00000588749 CSNK2A1P68400 391 aaPredicted RBP12.91□□□□□ -0.34
CACTIN-206ENST00000588749 SF3A3Q12874 501 aaKnown RBP eCLIP12.91□□□□□ -0.34
CACTIN-206ENST00000588749 PRAMEF8Q5VWM4 474 aa12.91□□□□□ -0.34
CACTIN-206ENST00000588749 PRAMEF7Q5VXH5 474 aa12.91□□□□□ -0.34
CACTIN-206ENST00000588749 TMPPEQ6ZT21 453 aa12.91□□□□□ -0.34
CACTIN-206ENST00000588749 ZNF550Q7Z398 422 aa12.91□□□□□ -0.34
CACTIN-206ENST00000588749 NUFIP2Q7Z417 695 aaKnown RBP12.91□□□□□ -0.34
CACTIN-206ENST00000588749 STK32CQ86UX6 486 aa12.91□□□□□ -0.34
CACTIN-206ENST00000588749 ADGRG3Q86Y34 549 aa12.91□□□□□ -0.34
CACTIN-206ENST00000588749 CLIP4Q8N3C7 705 aa12.91□□□□□ -0.34
CACTIN-206ENST00000588749 NFKBIDQ8NI38 313 aa12.91□□□□□ -0.34
CACTIN-206ENST00000588749 BBS10Q8TAM1 723 aa12.91□□□□□ -0.34
CACTIN-206ENST00000588749 ARL5BQ96KC2 179 aa12.91□□□□□ -0.34
CACTIN-206ENST00000588749 WFIKKN1Q96NZ8 548 aa12.91□□□□□ -0.34
CACTIN-206ENST00000588749 MED18Q9BUE0 208 aa12.91□□□□□ -0.34
CACTIN-206ENST00000588749 IKZF5Q9H5V7 419 aa12.91□□□□□ -0.34
CACTIN-206ENST00000588749 GP6Q9HCN6 339 aa12.91□□□□□ -0.34
CACTIN-206ENST00000588749 KLHL9Q9P2J3 617 aa12.91□□□□□ -0.34
CACTIN-206ENST00000588749 OSGIN1Q9UJX0 560 aa12.91□□□□□ -0.34
CACTIN-206ENST00000588749 ZNF232Q9UNY5 417 aa12.91□□□□□ -0.34
CACTIN-206ENST00000588749 TMED7Q9Y3B3 224 aa12.91□□□□□ -0.34
CACTIN-206ENST00000588749 ROS1P08922 2347 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 PRR14LQ5THK1 2151 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 ANGPT2O15123 496 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 PGM3O95394 542 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 YES1P07947 543 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 VIMP08670 466 aaKnown RBP12.9□□□□□ -0.34
CACTIN-206ENST00000588749 ARAFP10398 606 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 DNAJA1P31689 397 aaKnown RBP12.9□□□□□ -0.34
CACTIN-206ENST00000588749 CDK6Q00534 326 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 RASGEF1BQ0VAM2 473 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 ZNF311Q5JNZ3 666 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 ANKRD34AQ69YU3 496 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 DLEU7Q6UYE1 221 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 BEND4Q6ZU67 534 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 DHDDSQ86SQ9 333 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 CADM2Q8N3J6 435 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 ZHX1-C8orf76Q96EF9 292 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 PSD2Q9BQI7 771 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 CPPED1Q9BRF8 314 aaPredicted RBP12.9□□□□□ -0.34
CACTIN-206ENST00000588749 SPATA9Q9BWV2 254 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 LIME1Q9H400 295 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 ARMC7Q9H6L4 198 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 BCL2L10Q9HD36 194 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 ING1Q9UK53 422 aaPredicted RBP12.9□□□□□ -0.34
CACTIN-206ENST00000588749 CORO2BQ9UQ03 480 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 IFT52Q9Y366 437 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 NDUFAF1Q9Y375 327 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 HDGFL3Q9Y3E1 203 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 CHST2Q9Y4C5 530 aa12.9□□□□□ -0.34
CACTIN-206ENST00000588749 TMEM72A0PK05 275 aa12.89□□□□□ -0.35
CACTIN-206ENST00000588749 EVPLLA8MZ36 301 aa12.89□□□□□ -0.35
CACTIN-206ENST00000588749 CYTIPO60759 359 aa12.89□□□□□ -0.35
CACTIN-206ENST00000588749 GOSR1O95249 250 aa12.89□□□□□ -0.35
CACTIN-206ENST00000588749 HRGP04196 525 aa12.89□□□□□ -0.35
CACTIN-206ENST00000588749 PRG2P13727 222 aa12.89□□□□□ -0.35
CACTIN-206ENST00000588749 FKBP2P26885 142 aaKnown RBP12.89□□□□□ -0.35
CACTIN-206ENST00000588749 ACAA2P42765 397 aaKnown RBP12.89□□□□□ -0.35
CACTIN-206ENST00000588749 CLK1P49759 484 aaKnown RBP12.89□□□□□ -0.35
CACTIN-206ENST00000588749 COPZ1P61923 177 aa12.89□□□□□ -0.35
CACTIN-206ENST00000588749 GUCY1A3Q02108 690 aa12.89□□□□□ -0.35
CACTIN-206ENST00000588749 ZSWIM7Q19AV6 140 aa12.89□□□□□ -0.35
CACTIN-206ENST00000588749 METTL21CQ5VZV1 264 aa12.89□□□□□ -0.35
CACTIN-206ENST00000588749 CGB2Q6NT52 195 aa12.89□□□□□ -0.35
CACTIN-206ENST00000588749 TFAP2EQ6VUC0 442 aa12.89□□□□□ -0.35
CACTIN-206ENST00000588749 STAC2Q6ZMT1 411 aa12.89□□□□□ -0.35
CACTIN-206ENST00000588749 RETREG3Q86VR2 466 aa12.89□□□□□ -0.35
CACTIN-206ENST00000588749 ZNF775Q96BV0 537 aaPredicted RBP12.89□□□□□ -0.35
CACTIN-206ENST00000588749 DDIT4LQ96D03 193 aa12.89□□□□□ -0.35
CACTIN-206ENST00000588749 ZC3HAV1LQ96H79 300 aaKnown RBP12.89□□□□□ -0.35
CACTIN-206ENST00000588749 ZNF300Q96RE9 604 aaPredicted RBP12.89□□□□□ -0.35
CACTIN-206ENST00000588749 TACO1Q9BSH4 297 aaKnown RBP12.89□□□□□ -0.35
CACTIN-206ENST00000588749 BCO1Q9HAY6 547 aa12.89□□□□□ -0.35
CACTIN-206ENST00000588749 FANCFQ9NPI8 374 aa12.89□□□□□ -0.35
CACTIN-206ENST00000588749 MED4Q9NPJ6 270 aa12.89□□□□□ -0.35
CACTIN-206ENST00000588749 ZNF226Q9NYT6 803 aa12.89□□□□□ -0.35
CACTIN-206ENST00000588749 C6orf203Q9P0P8 240 aaPredicted RBP12.89□□□□□ -0.35
CACTIN-206ENST00000588749 GMEB1Q9Y692 573 aa12.89□□□□□ -0.35
CACTIN-206ENST00000588749 ZC3H12DA2A288 527 aaKnown RBP12.88□□□□□ -0.35
CACTIN-206ENST00000588749 ZNF208O43345 1280 aa12.88□□□□□ -0.35
CACTIN-206ENST00000588749 FRS3O43559 492 aa12.88□□□□□ -0.35
CACTIN-206ENST00000588749 PMS2P2O95744 297 aa12.88□□□□□ -0.35
CACTIN-206ENST00000588749 ETS2P15036 469 aa12.88□□□□□ -0.35
CACTIN-206ENST00000588749 GPX2P18283 190 aa12.88□□□□□ -0.35
CACTIN-206ENST00000588749 ARFIP2P53365 341 aa12.88□□□□□ -0.35
CACTIN-206ENST00000588749 OR2B6P58173 313 aa12.88□□□□□ -0.35
CACTIN-206ENST00000588749 NFYCQ13952 458 aa12.88□□□□□ -0.35
CACTIN-206ENST00000588749 SCARB2Q14108 478 aa12.88□□□□□ -0.35
CACTIN-206ENST00000588749 RUNDC3AQ59EK9 446 aa12.88□□□□□ -0.35
CACTIN-206ENST00000588749 ABLIM2Q6H8Q1 611 aa12.88□□□□□ -0.35
CACTIN-206ENST00000588749 WBP2NLQ6ICG8 309 aa12.88□□□□□ -0.35
CACTIN-206ENST00000588749 REEP3Q6NUK4 255 aa12.88□□□□□ -0.35
CACTIN-206ENST00000588749 SERPINA11Q86U17 422 aa12.88□□□□□ -0.35
CACTIN-206ENST00000588749 MTDHQ86UE4 582 aaKnown RBP12.88□□□□□ -0.35
CACTIN-206ENST00000588749 KRT73Q86Y46 540 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms