RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 ANKDD1AQ495B1 522 aa12.58□□□□□ -0.4
TPM1-215ENST00000558868 C3orf38Q5JPI3 329 aa12.58□□□□□ -0.4
TPM1-215ENST00000558868 CLEC12AQ5QGZ9 265 aa12.58□□□□□ -0.4
TPM1-215ENST00000558868 FAM69BQ5VUD6 431 aa12.58□□□□□ -0.4
TPM1-215ENST00000558868 DESI1Q6ICB0 168 aa12.58□□□□□ -0.4
TPM1-215ENST00000558868 DEFB124Q8NES8 71 aa12.58□□□□□ -0.4
TPM1-215ENST00000558868 NLGN4YQ8NFZ3 816 aaPredicted RBP12.58□□□□□ -0.4
TPM1-215ENST00000558868 RNF138Q8WVD3 245 aa12.58□□□□□ -0.4
TPM1-215ENST00000558868 RFKQ969G6 155 aa12.58□□□□□ -0.4
TPM1-215ENST00000558868 MUL1Q969V5 352 aa12.58□□□□□ -0.4
TPM1-215ENST00000558868 SPACA9Q96E40 222 aaPredicted RBP12.58□□□□□ -0.4
TPM1-215ENST00000558868 CRELD1Q96HD1 420 aa12.58□□□□□ -0.4
TPM1-215ENST00000558868 RASL10BQ96S79 203 aa12.58□□□□□ -0.4
TPM1-215ENST00000558868 SECISBP2Q96T21 854 aaKnown RBP12.58□□□□□ -0.4
TPM1-215ENST00000558868 RBM38Q9H0Z9 239 aaKnown RBP12.58□□□□□ -0.4
TPM1-215ENST00000558868 UBQLN3Q9H347 655 aa12.58□□□□□ -0.4
TPM1-215ENST00000558868 SIGLEC7Q9Y286 467 aa12.58□□□□□ -0.4
TPM1-215ENST00000558868 ZNF337Q9Y3M9 751 aa12.58□□□□□ -0.4
TPM1-215ENST00000558868 ANKUB1A6NFN9 424 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 ZNF99A8MXY4 864 aaPredicted RBP12.57□□□□□ -0.4
TPM1-215ENST00000558868 M0R129 80 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 SURF4O15260 269 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 PRODHO43272 600 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 SEC14L2O76054 403 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 TNFSF15O95150 251 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 NDUFB2O95178 105 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 PCMT1P22061 227 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 CD82P27701 267 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 TACR3P29371 465 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 OTX2P32243 289 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 POLR2HP52434 150 aaKnown RBP12.57□□□□□ -0.4
TPM1-215ENST00000558868 NUDT6P53370 316 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 CLDN6P56747 220 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 EMX1Q04741 257 aaPredicted RBP12.57□□□□□ -0.4
TPM1-215ENST00000558868 PIGFQ07326 219 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 SNTA1Q13424 505 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 DNASE1L3Q13609 305 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 KIF26BQ2KJY2 2108 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 KLHL22Q53GT1 634 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 XAF1Q6GPH4 301 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 SLC30A6Q6NXT4 461 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 C5orf46Q6UWT4 87 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 LYPD8Q6UX82 237 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 C16orf47Q6ZP98 133 aaPredicted RBP12.57□□□□□ -0.4
TPM1-215ENST00000558868 PPP1R32Q7Z5V6 425 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 TMPRSS12Q86WS5 348 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 RAB43Q86YS6 212 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 LNX2Q8N448 690 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 OR5M3Q8NGP4 307 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 OR13F1Q8NGS4 319 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 OR13C2Q8NGS9 318 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 OR4Q3Q8NH05 313 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 ZNF420Q8TAQ5 688 aaPredicted RBP12.57□□□□□ -0.4
TPM1-215ENST00000558868 GPR119Q8TDV5 335 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 DUSP19Q8WTR2 217 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 LIPHQ8WWY8 451 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 ST8SIA1Q92185 356 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 SGCDQ92629 289 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 TMIGD2Q96BF3 282 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 LRR1Q96L50 414 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 SIGLEC11Q96RL6 698 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 IFT27Q9BW83 186 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 FN3KQ9H479 309 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 METTL7AQ9H8H3 244 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 ZNF160Q9HCG1 818 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 TAS2R10Q9NYW0 307 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 DNAJC27Q9NZQ0 273 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 KLRF1Q9NZS2 232 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 FOXJ2Q9P0K8 574 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 H2AFY2Q9P0M6 372 aaPredicted RBP12.57□□□□□ -0.4
TPM1-215ENST00000558868 RSL24D1Q9UHA3 163 aaKnown RBP12.57□□□□□ -0.4
TPM1-215ENST00000558868 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.57□□□□□ -0.4
TPM1-215ENST00000558868 CEPT1Q9Y6K0 416 aa12.57□□□□□ -0.4
TPM1-215ENST00000558868 PMS2P1A4D2B8 440 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 KDM4EB2RXH2 506 aaPredicted RBP12.56□□□□□ -0.4
TPM1-215ENST00000558868 FAM47E-STBD1D6RA91 191 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 H3BSA7 217 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 GNB5O14775 395 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 RAD1O60671 282 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 ITGA10O75578 1167 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 SLC25A12O75746 678 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 IFNGP01579 166 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 FTH1P19P0C7X4 201 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 FUT1P19526 365 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 PTNP21246 168 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 CSRP1P21291 193 aaKnown RBP12.56□□□□□ -0.4
TPM1-215ENST00000558868 SLC15A1P46059 708 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 SSR4P51571 173 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 SH3BGRP55822 239 aaPredicted RBP12.56□□□□□ -0.4
TPM1-215ENST00000558868 PRPS1P60891 318 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 ST3GAL4Q11206 333 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 QPRTQ15274 297 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 TBCEQ15813 527 aaPredicted RBP12.56□□□□□ -0.4
TPM1-215ENST00000558868 COL28A1Q2UY09 1125 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 CNPY1Q3B7I2 92 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 SYT14P1Q58G82 188 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 TMEM81Q6P7N7 255 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 GRINAQ7Z429 371 aa12.56□□□□□ -0.4
TPM1-215ENST00000558868 CLVS1Q8IUQ0 354 aaPredicted RBP12.56□□□□□ -0.4
TPM1-215ENST00000558868 ALDH16A1Q8IZ83 802 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms