RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 PGDP52209 483 aa16.84■□□□□ 0.29
POLR2J3-205ENST00000489144 RIDAP52758 137 aaKnown RBP16.84■□□□□ 0.29
POLR2J3-205ENST00000489144 TRA2BP62995 288 aaKnown RBP16.84■□□□□ 0.29
POLR2J3-205ENST00000489144 FOXK2Q01167 660 aa16.84■□□□□ 0.29
POLR2J3-205ENST00000489144 SYPL1Q16563 259 aa16.84■□□□□ 0.29
POLR2J3-205ENST00000489144 HLA-BQ31612 363 aa16.84■□□□□ 0.29
POLR2J3-205ENST00000489144 PROX2Q3B8N5 592 aa16.84■□□□□ 0.29
POLR2J3-205ENST00000489144 C17orf82Q86X59 251 aaPredicted RBP16.84■□□□□ 0.29
POLR2J3-205ENST00000489144 HIPK1Q86Z02 1210 aa16.84■□□□□ 0.29
POLR2J3-205ENST00000489144 NXPE2Q96DL1 559 aa16.84■□□□□ 0.29
POLR2J3-205ENST00000489144 SERINC2Q96SA4 455 aa16.84■□□□□ 0.29
POLR2J3-205ENST00000489144 RSPO3Q9BXY4 272 aaPredicted RBP16.84■□□□□ 0.29
POLR2J3-205ENST00000489144 OR51I1Q9H343 314 aa16.84■□□□□ 0.29
POLR2J3-205ENST00000489144 PILRBQ9UKJ0 227 aa16.84■□□□□ 0.29
POLR2J3-205ENST00000489144 FABP12A6NFH5 140 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 INMT-MINDY4F8WBC2 141 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 HMGN4O00479 90 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 FGF17O60258 216 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 RNF144AP50876 292 aaPredicted RBP16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 PUM1Q14671 1186 aaKnown RBP eCLIP16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 OGFOD3Q6PK18 319 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 FAM111BQ6SJ93 734 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 GALNT5Q7Z7M9 940 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 SLC38A5Q8WUX1 472 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 NEURL3Q96EH8 262 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 TREX2Q9BQ50 279 aaPredicted RBP16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 QRSL1Q9H0R6 528 aaKnown RBP16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 MED28Q9H204 178 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 IMPAD1Q9NX62 359 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 ZNF780BQ9Y6R6 833 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 IGHV1OR21-1A0A087WYE8 117 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 LOC390937A0A1W2PQ73 354 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 ZNF729A6NN14 1252 aaPredicted RBP16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 HMGN2P05204 90 aaKnown RBP16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 FBP1P09467 338 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 PRKAR1AP10644 381 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 GNSP15586 552 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 PPIBP23284 216 aaKnown RBP16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 PCGF2P35227 344 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 GPX4P36969 197 aaPredicted RBP16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 BUD31P41223 144 aaPredicted RBP16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 ARRB1P49407 418 aaPredicted RBP16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 RNF4P78317 190 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 WDR5BQ86VZ2 330 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 SPPL2AQ8TCT8 520 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 TMEM19Q96HH6 336 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 ZNF681Q96N22 645 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 BARHL1Q9BZE3 327 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 DNTTIP1Q9H147 329 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 NEUROD4Q9HD90 331 aa16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 TMEM184BQ9Y519 407 aaPredicted RBP16.83■□□□□ 0.28
POLR2J3-205ENST00000489144 CELSR3Q9NYQ7 3312 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 FREM2Q5SZK8 3169 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 LILRA5A6NI73 299 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 M0R296 226 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 AIPO00170 330 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 GALR3O60755 368 aaPredicted RBP16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 CD63P08962 238 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 CYP4B1P13584 511 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 CSNK2A2P19784 350 aaPredicted RBP16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 KCNJ5P48544 419 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 PYDC2Q56P42 97 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 GUSBP11Q6P575 273 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 ZNF655Q8N720 491 aaPredicted RBP16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 C19orf18Q8NEA5 215 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 CCDC74AQ96AQ1 378 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 PEX11GQ96HA9 241 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 SLC35G5Q96KT7 338 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 PDCD10Q9BUL8 212 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 CORO2BQ9UQ03 480 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 CBY1Q9Y3M2 126 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 URADA6NGE7 173 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 M0R233 179 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 WBP4O75554 376 aaKnown RBP16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 TSPAN19P0C672 248 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 RAB3BP20337 219 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 TGM4P49221 684 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 RORCP51449 518 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 TEX30Q5JUR7 227 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 TCEAL6Q6IPX3 200 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 CA13Q8N1Q1 262 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 LNX2Q8N448 690 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 DNAJC22Q8N4W6 341 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 C12orf45Q8N5I9 185 aaPredicted RBP16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 EIF4E3Q8N5X7 224 aaKnown RBP16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 RCBTB1Q8NDN9 531 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 OR7G2Q8NG99 324 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 KIAA1143Q96AT1 154 aaPredicted RBP16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 SAMD4AQ9UPU9 718 aaKnown RBP16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 ZNF451Q9Y4E5 1061 aa16.82■□□□□ 0.28
POLR2J3-205ENST00000489144 J3KTA2 159 aa16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 ANXA3P12429 323 aa16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 PCP4P48539 62 aa16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 FOXL2P58012 376 aa16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 CBLL1Q75N03 491 aa16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 HSD17B13Q7Z5P4 300 aaPredicted RBP16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 ELP5Q8TE02 316 aa16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 CXorf58Q96LI9 332 aa16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 ACTR6Q9GZN1 396 aa16.81■□□□□ 0.28
POLR2J3-205ENST00000489144 ACSS1Q9NUB1 689 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms