RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 PRG2P13727 222 aa14.09□□□□□ -0.15
GABPA-203ENST00000487266 CRYGSP22914 178 aa14.09□□□□□ -0.15
GABPA-203ENST00000487266 TACR3P29371 465 aa14.09□□□□□ -0.15
GABPA-203ENST00000487266 APOBEC1P41238 236 aaKnown RBP14.09□□□□□ -0.15
GABPA-203ENST00000487266 PCYT1AP49585 367 aa14.09□□□□□ -0.15
GABPA-203ENST00000487266 LIN52Q52LA3 116 aa14.09□□□□□ -0.15
GABPA-203ENST00000487266 LRIF1Q5T3J3 769 aa14.09□□□□□ -0.15
GABPA-203ENST00000487266 GTF2IRD2BQ6EKJ0 949 aa14.09□□□□□ -0.15
GABPA-203ENST00000487266 TMPPEQ6ZT21 453 aa14.09□□□□□ -0.15
GABPA-203ENST00000487266 GTF2IRD2Q86UP8 949 aa14.09□□□□□ -0.15
GABPA-203ENST00000487266 CXorf67Q86X51 503 aaPredicted RBP14.09□□□□□ -0.15
GABPA-203ENST00000487266 CLIP4Q8N3C7 705 aa14.09□□□□□ -0.15
GABPA-203ENST00000487266 SLC25A43Q8WUT9 341 aaPredicted RBP14.09□□□□□ -0.15
GABPA-203ENST00000487266 RSPO3Q9BXY4 272 aaPredicted RBP14.09□□□□□ -0.15
GABPA-203ENST00000487266 PRSS50Q9UI38 385 aa14.09□□□□□ -0.15
GABPA-203ENST00000487266 OSGIN1Q9UJX0 560 aa14.09□□□□□ -0.15
GABPA-203ENST00000487266 TMED7Q9Y3B3 224 aa14.09□□□□□ -0.15
GABPA-203ENST00000487266 RAI1Q7Z5J4 1906 aaPredicted RBP14.08□□□□□ -0.16
GABPA-203ENST00000487266 TRBV5-3A0A0A0MS03 114 aa14.08□□□□□ -0.16
GABPA-203ENST00000487266 ZC3H12DA2A288 527 aaKnown RBP14.08□□□□□ -0.16
GABPA-203ENST00000487266 EDF1O60869 148 aaKnown RBP14.08□□□□□ -0.16
GABPA-203ENST00000487266 GCM2O75603 506 aaPredicted RBP14.08□□□□□ -0.16
GABPA-203ENST00000487266 ATE1O95260 518 aa14.08□□□□□ -0.16
GABPA-203ENST00000487266 NCF2P19878 526 aaPredicted RBP14.08□□□□□ -0.16
GABPA-203ENST00000487266 LOXP28300 417 aaPredicted RBP14.08□□□□□ -0.16
GABPA-203ENST00000487266 ATP4BP51164 291 aa14.08□□□□□ -0.16
GABPA-203ENST00000487266 RASGEF1BQ0VAM2 473 aa14.08□□□□□ -0.16
GABPA-203ENST00000487266 SF3A3Q12874 501 aaKnown RBP eCLIP14.08□□□□□ -0.16
GABPA-203ENST00000487266 ABLIM2Q6H8Q1 611 aa14.08□□□□□ -0.16
GABPA-203ENST00000487266 BEND4Q6ZU67 534 aa14.08□□□□□ -0.16
GABPA-203ENST00000487266 STK32CQ86UX6 486 aa14.08□□□□□ -0.16
GABPA-203ENST00000487266 GABRG1Q8N1C3 465 aa14.08□□□□□ -0.16
GABPA-203ENST00000487266 CADM2Q8N3J6 435 aa14.08□□□□□ -0.16
GABPA-203ENST00000487266 NINJ1Q92982 152 aa14.08□□□□□ -0.16
GABPA-203ENST00000487266 ACTR6Q9GZN1 396 aa14.08□□□□□ -0.16
GABPA-203ENST00000487266 ZNF385DQ9H6B1 395 aa14.08□□□□□ -0.16
GABPA-203ENST00000487266 BCO1Q9HAY6 547 aa14.08□□□□□ -0.16
GABPA-203ENST00000487266 ZNF226Q9NYT6 803 aa14.08□□□□□ -0.16
GABPA-203ENST00000487266 CALML5Q9NZT1 146 aa14.08□□□□□ -0.16
GABPA-203ENST00000487266 KLHL9Q9P2J3 617 aa14.08□□□□□ -0.16
GABPA-203ENST00000487266 A0A0G2JND7 137 aa14.07□□□□□ -0.16
GABPA-203ENST00000487266 RAF1P04049 648 aa14.07□□□□□ -0.16
GABPA-203ENST00000487266 YES1P07947 543 aa14.07□□□□□ -0.16
GABPA-203ENST00000487266 BMP2P12643 396 aa14.07□□□□□ -0.16
GABPA-203ENST00000487266 DNASE1P24855 282 aa14.07□□□□□ -0.16
GABPA-203ENST00000487266 ACAA2P42765 397 aaKnown RBP14.07□□□□□ -0.16
GABPA-203ENST00000487266 MAGEA8P43361 318 aa14.07□□□□□ -0.16
GABPA-203ENST00000487266 POLR2HP52434 150 aaKnown RBP14.07□□□□□ -0.16
GABPA-203ENST00000487266 HOXC5Q00444 222 aa14.07□□□□□ -0.16
GABPA-203ENST00000487266 FADDQ13158 208 aa14.07□□□□□ -0.16
GABPA-203ENST00000487266 GNA13Q14344 377 aa14.07□□□□□ -0.16
GABPA-203ENST00000487266 RNF220Q5VTB9 566 aa14.07□□□□□ -0.16
GABPA-203ENST00000487266 ALKBH2Q6NS38 261 aa14.07□□□□□ -0.16
GABPA-203ENST00000487266 SPNS3Q6ZMD2 512 aa14.07□□□□□ -0.16
GABPA-203ENST00000487266 SERPINA11Q86U17 422 aa14.07□□□□□ -0.16
GABPA-203ENST00000487266 COMTD1Q86VU5 262 aa14.07□□□□□ -0.16
GABPA-203ENST00000487266 CCDC103Q8IW40 242 aa14.07□□□□□ -0.16
GABPA-203ENST00000487266 SLC43A2Q8N370 569 aa14.07□□□□□ -0.16
GABPA-203ENST00000487266 NFKBIDQ8NI38 313 aa14.07□□□□□ -0.16
GABPA-203ENST00000487266 S100PBPQ96BU1 408 aa14.07□□□□□ -0.16
GABPA-203ENST00000487266 A4GALTQ9NPC4 353 aa14.07□□□□□ -0.16
GABPA-203ENST00000487266 SPIN1Q9Y657 262 aaPredicted RBP14.07□□□□□ -0.16
GABPA-203ENST00000487266 ZNF716A6NP11 495 aa14.06□□□□□ -0.16
GABPA-203ENST00000487266 GOSR1O95249 250 aa14.06□□□□□ -0.16
GABPA-203ENST00000487266 PMS2P2O95744 297 aa14.06□□□□□ -0.16
GABPA-203ENST00000487266 ADAP00813 363 aa14.06□□□□□ -0.16
GABPA-203ENST00000487266 ARAFP10398 606 aa14.06□□□□□ -0.16
GABPA-203ENST00000487266 IMPDH2P12268 514 aa14.06□□□□□ -0.16
GABPA-203ENST00000487266 SLC1A3P43003 542 aa14.06□□□□□ -0.16
GABPA-203ENST00000487266 OR2B6P58173 313 aa14.06□□□□□ -0.16
GABPA-203ENST00000487266 CSNK2A1P68400 391 aaPredicted RBP14.06□□□□□ -0.16
GABPA-203ENST00000487266 BNIP2Q12982 314 aa14.06□□□□□ -0.16
GABPA-203ENST00000487266 KEAP1Q14145 624 aa14.06□□□□□ -0.16
GABPA-203ENST00000487266 SELPLGQ14242 412 aa14.06□□□□□ -0.16
GABPA-203ENST00000487266 GCNT6Q5T4J0 391 aa14.06□□□□□ -0.16
GABPA-203ENST00000487266 MTDHQ86UE4 582 aaKnown RBP14.06□□□□□ -0.16
GABPA-203ENST00000487266 WFDC8Q8IUA0 241 aa14.06□□□□□ -0.16
GABPA-203ENST00000487266 FOXC2Q99958 501 aa14.06□□□□□ -0.16
GABPA-203ENST00000487266 RAD21L1Q9H4I0 556 aa14.06□□□□□ -0.16
GABPA-203ENST00000487266 GP6Q9HCN6 339 aa14.06□□□□□ -0.16
GABPA-203ENST00000487266 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.06□□□□□ -0.16
GABPA-203ENST00000487266 ROS1P08922 2347 aa14.06□□□□□ -0.16
GABPA-203ENST00000487266 A0A0G2JPF8 293 aa14.05□□□□□ -0.16
GABPA-203ENST00000487266 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.05□□□□□ -0.16
GABPA-203ENST00000487266 A0A1W2PP18 115 aa14.05□□□□□ -0.16
GABPA-203ENST00000487266 TMEM247A6NEH6 219 aa14.05□□□□□ -0.16
GABPA-203ENST00000487266 HNRNPCL2B2RXH8 293 aa14.05□□□□□ -0.16
GABPA-203ENST00000487266 HNRNPCL3B7ZW38 293 aa14.05□□□□□ -0.16
GABPA-203ENST00000487266 FAAHO00519 579 aa14.05□□□□□ -0.16
GABPA-203ENST00000487266 HNRNPCL1O60812 293 aaKnown RBP14.05□□□□□ -0.16
GABPA-203ENST00000487266 PGM3O95394 542 aa14.05□□□□□ -0.16
GABPA-203ENST00000487266 IGHV3-9P01782 118 aa14.05□□□□□ -0.16
GABPA-203ENST00000487266 THBS1P07996 1170 aa14.05□□□□□ -0.16
GABPA-203ENST00000487266 HNRNPCL4P0DMR1 293 aa14.05□□□□□ -0.16
GABPA-203ENST00000487266 PSMB1P20618 241 aaKnown RBP14.05□□□□□ -0.16
GABPA-203ENST00000487266 NTF4P34130 210 aa14.05□□□□□ -0.16
GABPA-203ENST00000487266 HTR3AP46098 478 aa14.05□□□□□ -0.16
GABPA-203ENST00000487266 OR3A2P47893 321 aa14.05□□□□□ -0.16
GABPA-203ENST00000487266 LARS2Q15031 903 aaKnown RBP14.05□□□□□ -0.16
GABPA-203ENST00000487266 ZNF311Q5JNZ3 666 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms