RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 PLSCR4Q9NRQ2 329 aa5.73□□□□□ -1.49
CTDSPL-208ENST00000486978 GLRX2Q9NS18 164 aa5.73□□□□□ -1.49
CTDSPL-208ENST00000486978 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.73□□□□□ -1.49
CTDSPL-208ENST00000486978 ARGLU1Q9NWB6 273 aaPredicted RBP5.73□□□□□ -1.49
CTDSPL-208ENST00000486978 ELOVL5Q9NYP7 299 aa5.73□□□□□ -1.49
CTDSPL-208ENST00000486978 NDRG3Q9UGV2 375 aa5.73□□□□□ -1.49
CTDSPL-208ENST00000486978 PROCRQ9UNN8 238 aa5.73□□□□□ -1.49
CTDSPL-208ENST00000486978 LIPT1Q9Y234 373 aa5.73□□□□□ -1.49
CTDSPL-208ENST00000486978 SLC35A3Q9Y2D2 325 aa5.73□□□□□ -1.49
CTDSPL-208ENST00000486978 TESMINQ9Y4I5 508 aa5.73□□□□□ -1.49
CTDSPL-208ENST00000486978 USH1CQ9Y6N9 552 aa5.73□□□□□ -1.49
CTDSPL-208ENST00000486978 FREM1Q5H8C1 2179 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 FAM234BA2RU67 622 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 PRAMEF27A3QJZ7 478 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 DEFB108AA8MXU0 73 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 HMGB1P1B2RPK0 211 aaPredicted RBP5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 CASKO14936 926 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 POLR3GO15318 223 aaPredicted RBP5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 TGDSO95455 350 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 ANP32DO95626 131 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 KRT75O95678 551 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 C1QCP02747 245 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 GSNP06396 782 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 CHRM4P08173 479 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 PABPC4LP0CB38 370 aaKnown RBP5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 ZCCHC18P0CG32 403 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 POU2F1P14859 743 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 H2AFXP16104 143 aaPredicted RBP5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 SLC7A1P30825 629 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 CCKARP32238 428 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 PGM1P36871 562 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 MAGEA8P43361 318 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 KCNJ5P48544 419 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 MRPL19P49406 292 aaKnown RBP5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 POLR2JP52435 117 aaKnown RBP5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 SESN3P58005 492 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 STX1BP61266 288 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 KCNJ10P78508 379 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 CHRNEQ04844 493 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 FAM27E3Q08E93 113 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 RNPS1Q15287 305 aaKnown RBP5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 SYPL1Q16563 259 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 TMEM176BQ3YBM2 270 aaPredicted RBP5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 TIGD2Q4W5G0 525 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 COX20Q5RI15 118 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 GTF2IRD2BQ6EKJ0 949 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 EPGNQ6UW88 154 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 DNAJC14Q6Y2X3 702 aaPredicted RBP5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 LRRC74BQ6ZQY2 392 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 C22orf34Q6ZV56 151 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 HDXQ7Z353 690 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 GTF2IRD2Q86UP8 949 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 CMIPQ8IY22 773 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 MIER2Q8N344 545 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 ARIH2OSQ8N7S6 290 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 ANKFN1Q8N957 763 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 ZNF610Q8N9Z0 462 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 ATP6V1C2Q8NEY4 427 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 OR9I1Q8NGQ6 314 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 PNPT1Q8TCS8 783 aaKnown RBP5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 DYDC1Q8WWB3 177 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 TMEM234Q8WY98 164 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 PMM1Q92871 262 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 ZNF524Q96C55 264 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 C1orf159Q96HA4 380 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 ITCHQ96J02 903 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 SRXN1Q9BYN0 137 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 REG4Q9BYZ8 158 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 QRSL1Q9H0R6 528 aaKnown RBP5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 SLC38A1Q9H2H9 487 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 COQ10BQ9H8M1 238 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 VIPAS39Q9H9C1 493 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 SLCO1B3Q9NPD5 702 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 TCF7L2Q9NQB0 619 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 EXOSC3Q9NQT5 275 aaKnown RBP5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 SERINC1Q9NRX5 453 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 SLC6A13Q9NSD5 602 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 ACER3Q9NUN7 267 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 P2RX2Q9UBL9 471 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 CLEC4AQ9UMR7 237 aa5.72□□□□□ -1.49
CTDSPL-208ENST00000486978 A0A0G2JK05 382 aa5.71□□□□□ -1.5
CTDSPL-208ENST00000486978 A0A1W2PNR3 127 aa5.71□□□□□ -1.5
CTDSPL-208ENST00000486978 AGAP5A6NIR3 686 aa5.71□□□□□ -1.5
CTDSPL-208ENST00000486978 CLDN24A6NM45 220 aa5.71□□□□□ -1.5
CTDSPL-208ENST00000486978 A8MV72 311 aaPredicted RBP5.71□□□□□ -1.5
CTDSPL-208ENST00000486978 C16orf97H3BN30 126 aa5.71□□□□□ -1.5
CTDSPL-208ENST00000486978 J3QL48 77 aa5.71□□□□□ -1.5
CTDSPL-208ENST00000486978 TLX2O43763 284 aaPredicted RBP5.71□□□□□ -1.5
CTDSPL-208ENST00000486978 BCAS1O75363 584 aaPredicted RBP5.71□□□□□ -1.5
CTDSPL-208ENST00000486978 NR2F1P10589 423 aa5.71□□□□□ -1.5
CTDSPL-208ENST00000486978 ETFAP13804 333 aa5.71□□□□□ -1.5
CTDSPL-208ENST00000486978 RPS4Y1P22090 263 aaKnown RBP5.71□□□□□ -1.5
CTDSPL-208ENST00000486978 AGTR1P30556 359 aa5.71□□□□□ -1.5
CTDSPL-208ENST00000486978 RYKP34925 604 aa5.71□□□□□ -1.5
CTDSPL-208ENST00000486978 UGT2B10P36537 528 aa5.71□□□□□ -1.5
CTDSPL-208ENST00000486978 APOBEC1P41238 236 aaKnown RBP5.71□□□□□ -1.5
CTDSPL-208ENST00000486978 CRATP43155 626 aa5.71□□□□□ -1.5
CTDSPL-208ENST00000486978 IDH3AP50213 366 aa5.71□□□□□ -1.5
CTDSPL-208ENST00000486978 MVDP53602 400 aa5.71□□□□□ -1.5
CTDSPL-208ENST00000486978 RAC3P60763 192 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms