RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 TMEM45AQ9NWC5 275 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 VAPAQ9P0L0 249 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 C6orf203Q9P0P8 240 aaPredicted RBP11.48□□□□□ -0.57
HDAC1-209ENST00000484305 ZNF443Q9Y2A4 671 aaPredicted RBP11.48□□□□□ -0.57
HDAC1-209ENST00000484305 PLEKHA6Q9Y2H5 1048 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 CHST2Q9Y4C5 530 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 TEP1Q99973 2627 aaKnown RBP11.48□□□□□ -0.57
HDAC1-209ENST00000484305 CELSR1Q9NYQ6 3014 aa11.48□□□□□ -0.57
HDAC1-209ENST00000484305 PRRC2AP48634 2157 aaKnown RBP11.47□□□□□ -0.57
HDAC1-209ENST00000484305 TRBV5-3A0A0A0MS03 114 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 TMED7-TICAM2A0A0A6YYA0 188 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 TMEM247A6NEH6 219 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 DEFB108AA8MXU0 73 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 FAAHO00519 579 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 CYTIPO60759 359 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 FESP07332 822 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 BMP2P12643 396 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 TACR3P29371 465 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 ACAA2P42765 397 aaKnown RBP11.47□□□□□ -0.57
HDAC1-209ENST00000484305 SLC1A3P43003 542 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 HTR3AP46098 478 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 ART1P52961 327 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 CSNK2A1P68400 391 aaPredicted RBP11.47□□□□□ -0.57
HDAC1-209ENST00000484305 IRX1P78414 480 aaPredicted RBP11.47□□□□□ -0.57
HDAC1-209ENST00000484305 RASGEF1BQ0VAM2 473 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 FADDQ13158 208 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 RNF220Q5VTB9 566 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 TFAP2EQ6VUC0 442 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 CLIP4Q8N3C7 705 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 STON2Q8WXE9 905 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 NINJ1Q92982 152 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 ZNF775Q96BV0 537 aaPredicted RBP11.47□□□□□ -0.57
HDAC1-209ENST00000484305 ZNF300Q96RE9 604 aaPredicted RBP11.47□□□□□ -0.57
HDAC1-209ENST00000484305 ZNF385DQ9H6B1 395 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 BCO1Q9HAY6 547 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 ZNF226Q9NYT6 803 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 KLHL9Q9P2J3 617 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 OSGIN1Q9UJX0 560 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 TMED7Q9Y3B3 224 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 SPIN1Q9Y657 262 aaPredicted RBP11.47□□□□□ -0.57
HDAC1-209ENST00000484305 MED13LQ71F56 2210 aa11.47□□□□□ -0.57
HDAC1-209ENST00000484305 A0A0G2JND7 137 aa11.46□□□□□ -0.57
HDAC1-209ENST00000484305 A0A1W2PP18 115 aa11.46□□□□□ -0.57
HDAC1-209ENST00000484305 TMEM72A0PK05 275 aa11.46□□□□□ -0.57
HDAC1-209ENST00000484305 GCM2O75603 506 aaPredicted RBP11.46□□□□□ -0.57
HDAC1-209ENST00000484305 PMS2P2O95744 297 aa11.46□□□□□ -0.57
HDAC1-209ENST00000484305 THBDP07204 575 aa11.46□□□□□ -0.57
HDAC1-209ENST00000484305 THBS1P07996 1170 aa11.46□□□□□ -0.57
HDAC1-209ENST00000484305 PRG2P13727 222 aa11.46□□□□□ -0.57
HDAC1-209ENST00000484305 CRYGSP22914 178 aa11.46□□□□□ -0.57
HDAC1-209ENST00000484305 EDNRAP25101 427 aa11.46□□□□□ -0.57
HDAC1-209ENST00000484305 CLK1P49759 484 aaKnown RBP11.46□□□□□ -0.57
HDAC1-209ENST00000484305 POLR2HP52434 150 aaKnown RBP11.46□□□□□ -0.57
HDAC1-209ENST00000484305 LARS2Q15031 903 aaKnown RBP11.46□□□□□ -0.57
HDAC1-209ENST00000484305 SPNS3Q6ZMD2 512 aa11.46□□□□□ -0.57
HDAC1-209ENST00000484305 MTDHQ86UE4 582 aaKnown RBP11.46□□□□□ -0.57
HDAC1-209ENST00000484305 CXorf67Q86X51 503 aaPredicted RBP11.46□□□□□ -0.57
HDAC1-209ENST00000484305 ZNF440Q8IYI8 595 aa11.46□□□□□ -0.57
HDAC1-209ENST00000484305 PIK3IP1Q96FE7 263 aa11.46□□□□□ -0.57
HDAC1-209ENST00000484305 SPATA9Q9BWV2 254 aa11.46□□□□□ -0.57
HDAC1-209ENST00000484305 RSPO3Q9BXY4 272 aaPredicted RBP11.46□□□□□ -0.57
HDAC1-209ENST00000484305 ADAM19Q9H013 955 aa11.46□□□□□ -0.57
HDAC1-209ENST00000484305 RABEP2Q9H5N1 569 aa11.46□□□□□ -0.57
HDAC1-209ENST00000484305 IKZF5Q9H5V7 419 aa11.46□□□□□ -0.57
HDAC1-209ENST00000484305 BCL2L10Q9HD36 194 aa11.46□□□□□ -0.57
HDAC1-209ENST00000484305 ZNF232Q9UNY5 417 aa11.46□□□□□ -0.57
HDAC1-209ENST00000484305 HDGFL3Q9Y3E1 203 aa11.46□□□□□ -0.57
HDAC1-209ENST00000484305 GMEB1Q9Y692 573 aa11.46□□□□□ -0.57
HDAC1-209ENST00000484305 HIVEP1P15822 2718 aa11.46□□□□□ -0.58
HDAC1-209ENST00000484305 ZC3H12DA2A288 527 aaKnown RBP11.45□□□□□ -0.58
HDAC1-209ENST00000484305 ZNF724A8MTY0 619 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 ZNF814B7Z6K7 855 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 PGM3O95394 542 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 IMPDH2P12268 514 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 UQCRBP14927 111 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 PSMB1P20618 241 aaKnown RBP11.45□□□□□ -0.58
HDAC1-209ENST00000484305 DNASE1P24855 282 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 FKBP2P26885 142 aaKnown RBP11.45□□□□□ -0.58
HDAC1-209ENST00000484305 TSC22D1Q15714 1073 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 ZNF311Q5JNZ3 666 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 PRAMEF8Q5VWM4 474 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 PRAMEF7Q5VXH5 474 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 ABLIM2Q6H8Q1 611 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 PAMR1Q6UXH9 720 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 DLEU7Q6UYE1 221 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.45□□□□□ -0.58
HDAC1-209ENST00000484305 SERPINA11Q86U17 422 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 GABRG1Q8N1C3 465 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 CADM2Q8N3J6 435 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 NFKBIDQ8NI38 313 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 DDIT4LQ96D03 193 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 TACO1Q9BSH4 297 aaKnown RBP11.45□□□□□ -0.58
HDAC1-209ENST00000484305 ACTR6Q9GZN1 396 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 FANCFQ9NPI8 374 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 TMEM181Q9P2C4 612 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 TRIM33Q9UPN9 1127 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 IFT52Q9Y366 437 aa11.45□□□□□ -0.58
HDAC1-209ENST00000484305 ZNF716A6NP11 495 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 C5orf58C9J3I9 102 aa11.44□□□□□ -0.58
HDAC1-209ENST00000484305 ZNF208O43345 1280 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms