RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ALG10BQ5I7T1 473 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 C17orf107Q6ZR85 190 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 CMTM4Q8IZR5 234 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 ZNF676Q8N7Q3 588 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 RELL2Q8NC24 303 aaPredicted RBP11.78□□□□□ -0.52
VPS52-218ENST00000482399 SLC7A5P2Q9GIP4 190 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 SPAG17Q6Q759 2223 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 PLXND1Q9Y4D7 1925 aa11.77□□□□□ -0.52
VPS52-218ENST00000482399 PUDPQ08623 228 aa11.77□□□□□ -0.52
VPS52-218ENST00000482399 SLC22A10Q63ZE4 541 aa11.77□□□□□ -0.52
VPS52-218ENST00000482399 LSMEM1Q8N8F7 131 aa11.77□□□□□ -0.52
VPS52-218ENST00000482399 OR2A1Q8NGT9 310 aa11.77□□□□□ -0.52
VPS52-218ENST00000482399 SYNPRQ8TBG9 265 aa11.77□□□□□ -0.52
VPS52-218ENST00000482399 HSD17B8Q92506 261 aa11.77□□□□□ -0.52
VPS52-218ENST00000482399 ZC3HAV1LQ96H79 300 aaKnown RBP11.77□□□□□ -0.52
VPS52-218ENST00000482399 NMNAT3Q96T66 252 aa11.77□□□□□ -0.52
VPS52-218ENST00000482399 TMEM168Q9H0V1 697 aa11.77□□□□□ -0.52
VPS52-218ENST00000482399 TSPAN10Q9H1Z9 355 aaPredicted RBP11.77□□□□□ -0.52
VPS52-218ENST00000482399 SRMSQ9H3Y6 488 aa11.77□□□□□ -0.52
VPS52-218ENST00000482399 FBXL2Q9UKC9 423 aa11.77□□□□□ -0.52
VPS52-218ENST00000482399 ACAD8Q9UKU7 415 aa11.77□□□□□ -0.52
VPS52-218ENST00000482399 TVP23AA6NH52 213 aa11.77□□□□□ -0.53
VPS52-218ENST00000482399 UBL4AP11441 157 aa11.77□□□□□ -0.53
VPS52-218ENST00000482399 PVRP15151 417 aa11.77□□□□□ -0.53
VPS52-218ENST00000482399 CEBPBP17676 345 aa11.77□□□□□ -0.53
VPS52-218ENST00000482399 ACTR1BP42025 376 aa11.77□□□□□ -0.53
VPS52-218ENST00000482399 ACTR1AP61163 376 aa11.77□□□□□ -0.53
VPS52-218ENST00000482399 DECR1Q16698 335 aa11.77□□□□□ -0.53
VPS52-218ENST00000482399 GSG1Q2KHT4 349 aa11.77□□□□□ -0.53
VPS52-218ENST00000482399 SLC48A1Q6P1K1 146 aa11.77□□□□□ -0.53
VPS52-218ENST00000482399 ZNF511Q8NB15 262 aa11.77□□□□□ -0.53
VPS52-218ENST00000482399 TTLQ8NG68 377 aa11.77□□□□□ -0.53
VPS52-218ENST00000482399 DVL3Q92997 716 aaPredicted RBP11.77□□□□□ -0.53
VPS52-218ENST00000482399 PTP4A1Q93096 173 aa11.77□□□□□ -0.53
VPS52-218ENST00000482399 LINC00052Q96N35 136 aa11.77□□□□□ -0.53
VPS52-218ENST00000482399 TSSK2Q96PF2 358 aa11.77□□□□□ -0.53
VPS52-218ENST00000482399 KCNJ15Q99712 375 aa11.77□□□□□ -0.53
VPS52-218ENST00000482399 GDF15Q99988 308 aa11.77□□□□□ -0.53
VPS52-218ENST00000482399 GHITMQ9H3K2 345 aa11.77□□□□□ -0.53
VPS52-218ENST00000482399 FKRPQ9H9S5 495 aa11.77□□□□□ -0.53
VPS52-218ENST00000482399 SDHAF2Q9NX18 166 aa11.77□□□□□ -0.53
VPS52-218ENST00000482399 NDOR1Q9UHB4 597 aa11.77□□□□□ -0.53
VPS52-218ENST00000482399 CA5BQ9Y2D0 317 aa11.77□□□□□ -0.53
VPS52-218ENST00000482399 C4orf51C9J302 202 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 H7C1C5 153 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 CACNB4O00305 520 aaPredicted RBP11.76□□□□□ -0.53
VPS52-218ENST00000482399 GOSR2O14653 212 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 IMPA2O14732 288 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 SELENOFO60613 162 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 NUDT14O95848 222 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 SERPINA3P01011 423 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 ACSM4P0C7M7 580 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 CPMP14384 443 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 P2RY2P41231 377 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 AP3S2P59780 193 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 LCN6P62502 163 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 ERVK-25P63136 954 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 SQSTM1Q13501 440 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 PCGF3Q3KNV8 242 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 SCGB2B2Q4G0G5 96 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 EIPR1Q53HC9 387 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 HEPHL1Q6MZM0 1159 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 FAM220AQ7Z4H9 259 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 LRIG1Q96JA1 1093 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 CXorf58Q96LI9 332 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 RSPH9Q9H1X1 276 aaPredicted RBP11.76□□□□□ -0.53
VPS52-218ENST00000482399 ZMAT3Q9HA38 289 aaKnown RBP11.76□□□□□ -0.53
VPS52-218ENST00000482399 LIN7BQ9HAP6 207 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 APOBEC3BQ9UH17 382 aaKnown RBP11.76□□□□□ -0.53
VPS52-218ENST00000482399 FARSAQ9Y285 508 aaKnown RBP11.76□□□□□ -0.53
VPS52-218ENST00000482399 SPACA6W5XKT8 324 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 ZNF879B4DU55 563 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 RP2O75695 350 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 OR8G3PP0DMU2 310 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 F3P13726 295 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 GAS1P54826 345 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 SHC2P98077 582 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 HNRNPA1L2Q32P51 320 aaKnown RBP11.76□□□□□ -0.53
VPS52-218ENST00000482399 AMZ1Q400G9 498 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 THEM6Q8WUY1 208 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 TSEN15Q8WW01 171 aaKnown RBP11.76□□□□□ -0.53
VPS52-218ENST00000482399 ST8SIA4Q92187 359 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 CNOT9Q92600 299 aaKnown RBP11.76□□□□□ -0.53
VPS52-218ENST00000482399 WDR34Q96EX3 536 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 WDR89Q96FK6 387 aaPredicted RBP11.76□□□□□ -0.53
VPS52-218ENST00000482399 ADAD1Q96M93 576 aaKnown RBP11.76□□□□□ -0.53
VPS52-218ENST00000482399 EXO5Q9H790 373 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 BCL2L10Q9HD36 194 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 CD93Q9NPY3 652 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 CLDND1Q9NY35 253 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 KCMF1Q9P0J7 381 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 AKAP7Q9P0M2 348 aaPredicted RBP11.76□□□□□ -0.53
VPS52-218ENST00000482399 KLHL9Q9P2J3 617 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 ELF5Q9UKW6 265 aaPredicted RBP11.76□□□□□ -0.53
VPS52-218ENST00000482399 GPR34Q9UPC5 381 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 SLC35A3Q9Y2D2 325 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 PLXNA4Q9HCM2 1894 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 EDDM13A0A1B0GTR0 161 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 C17orf113A0A1B0GUU1 675 aa11.76□□□□□ -0.53
VPS52-218ENST00000482399 OR2W5A6NFC9 320 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms