RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 MRPS35P82673 323 aaKnown RBP5.43□□□□□ -1.54
HDAC3-206ENST00000471968 KRT31Q15323 416 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 TSTQ16762 297 aaKnown RBP5.43□□□□□ -1.54
HDAC3-206ENST00000471968 TSPO2Q5TGU0 170 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 LRRC8EQ6NSJ5 796 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 KCTD18Q6PI47 426 aaPredicted RBP5.43□□□□□ -1.54
HDAC3-206ENST00000471968 APOOLQ6UXV4 268 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 ZCCHC7Q8N3Z6 543 aaKnown RBP5.43□□□□□ -1.54
HDAC3-206ENST00000471968 SCCPDHQ8NBX0 429 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 FBXO27Q8NI29 283 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 C8orf46Q8TAG6 207 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 ELMOD3Q96FG2 381 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 SH3YL1Q96HL8 342 aaPredicted RBP5.43□□□□□ -1.54
HDAC3-206ENST00000471968 DCLRE1CQ96SD1 692 aaKnown RBP5.43□□□□□ -1.54
HDAC3-206ENST00000471968 PITHD1Q9GZP4 211 aaPredicted RBP5.43□□□□□ -1.54
HDAC3-206ENST00000471968 OR51B5Q9H339 312 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 ANKRA2Q9H9E1 313 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 TREX1Q9NSU2 369 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 DDX56Q9NY93 547 aaKnown RBP5.43□□□□□ -1.54
HDAC3-206ENST00000471968 KIF17Q9P2E2 1029 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 CHST2Q9Y4C5 530 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 NOX1Q9Y5S8 564 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 SMAD5-AS1Q9Y6J3 95 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 DNAH6Q9C0G6 4158 aa5.43□□□□□ -1.54
HDAC3-206ENST00000471968 hCG_1818297A0A087WSY0 165 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 A0A096LPE4 126 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 A0A1W2PPZ6 126 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 ZNF716A6NP11 495 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 APOC4-APOC2K7ER74 178 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 TMPRSS11DO60235 418 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 WDR47O94967 919 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 IGHV2-70P01814 119 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 APOC2P02655 101 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 THY1P04216 161 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 QDPRP09417 244 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 FAM58BPP0C7Q3 252 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 RBMY1CP0DJD4 496 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 PAX7P23759 505 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 EIF1P41567 113 aaKnown RBP5.42□□□□□ -1.54
HDAC3-206ENST00000471968 GDF5P43026 501 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 FOXA1P55317 472 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 EIF3EP60228 445 aaKnown RBP5.42□□□□□ -1.54
HDAC3-206ENST00000471968 SLC3A1Q07837 685 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 LTB4RQ15722 352 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 GKAP1Q5VSY0 366 aaPredicted RBP5.42□□□□□ -1.54
HDAC3-206ENST00000471968 ABLIM2Q6H8Q1 611 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 PAQR6Q6TCH4 344 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 CYP20A1Q6UW02 462 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 C6orf89Q6UWU4 347 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 ZNF101Q8IZC7 436 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 LINC00482Q8N8I6 264 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 GATSQ8NAP1 163 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 OR1K1Q8NGR3 316 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 IL17DQ8TAD2 202 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 ACTL9Q8TC94 416 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 ZNF473Q8WTR7 871 aaKnown RBP5.42□□□□□ -1.54
HDAC3-206ENST00000471968 SNX33Q8WV41 574 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 LINGO1Q96FE5 620 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 SSBP3Q9BWW4 388 aaPredicted RBP5.42□□□□□ -1.54
HDAC3-206ENST00000471968 NANOGQ9H9S0 305 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 TAAR3PQ9P1P4 343 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 FAM96BQ9Y3D0 163 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 HYOU1Q9Y4L1 999 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 NPTNQ9Y639 398 aa5.42□□□□□ -1.54
HDAC3-206ENST00000471968 ARPC4-TTLL3A0A0A6YYG9 625 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 KIR2DS1A0A191URI9 304 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 CTAGE9A4FU28 777 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 PRR23D1E9PI22 279 aaPredicted RBP5.41□□□□□ -1.54
HDAC3-206ENST00000471968 F5H0A9 414 aaPredicted RBP5.41□□□□□ -1.54
HDAC3-206ENST00000471968 PLPP1O14494 284 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 GPR171O14626 319 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 ERAL1O75616 437 aaKnown RBP5.41□□□□□ -1.54
HDAC3-206ENST00000471968 LGI1O95970 557 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 ATP1B1P05026 303 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 LINGO3P0C6S8 592 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 PRR23D2P0DMB1 279 aaPredicted RBP5.41□□□□□ -1.54
HDAC3-206ENST00000471968 PCNAP12004 261 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 FAHP16930 419 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 OGNP20774 298 aaKnown RBP5.41□□□□□ -1.54
HDAC3-206ENST00000471968 GLRXP35754 106 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 GP5P40197 560 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 PSPHP78330 225 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 PRR5P85299 388 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 UBXN1Q04323 297 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 SLC18A2Q05940 514 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 ZNF763Q0D2J5 394 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 PDK3Q15120 406 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 C18orf21Q32NC0 220 aaPredicted RBP5.41□□□□□ -1.54
HDAC3-206ENST00000471968 PCID2Q5JVF3 399 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 PHYHD1Q5SRE7 291 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 LRRC38Q5VT99 294 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 MRM1Q6IN84 353 aaKnown RBP5.41□□□□□ -1.54
HDAC3-206ENST00000471968 VASH1Q7L8A9 365 aaPredicted RBP5.41□□□□□ -1.54
HDAC3-206ENST00000471968 CALHM3Q86XJ0 350 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 FAM169BQ8N8A8 192 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 ACTRT2Q8TDY3 377 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 RGMAQ96B86 450 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 DNAJA3Q96EY1 480 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 C3orf30Q96M34 536 aa5.41□□□□□ -1.54
HDAC3-206ENST00000471968 VSTM2LQ96N03 204 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms