RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 TAGAPQ8N103 731 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 PRR18Q8N4B5 295 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 KLHDC1Q8N7A1 406 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 PLD5Q8N7P1 536 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 MFSD9Q8NBP5 474 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 OR52B6Q8NGF0 335 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 CTNNBL1Q8WYA6 563 aaPredicted RBP4.11□□□□□ -1.75
SDCBP-205ENST00000447267 RDH5Q92781 318 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 RAB8BQ92930 207 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 FAM136AQ96C01 138 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 RAB39BQ96DA2 213 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 FCRL5Q96RD9 977 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 RHOXF2Q9BQY4 288 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 ZNF670Q9BS34 389 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 OSBPL11Q9BXB4 747 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 AICDAQ9GZX7 198 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 FAM107BQ9H098 131 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 NDST4Q9H3R1 872 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 DYNLRB1Q9NP97 96 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 KLRF1Q9NZS2 232 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 TBK1Q9UHD2 729 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 PURGQ9UJV8 347 aaKnown RBP4.11□□□□□ -1.75
SDCBP-205ENST00000447267 ANAPC7Q9UJX3 599 aa4.11□□□□□ -1.75
SDCBP-205ENST00000447267 TRAV40A0A0B4J280 105 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 IQANK1A0A1B0GTG1 560 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 SMTNL1A8MU46 457 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 M0QYG6 137 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 TRIAP1O43715 76 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 CTNSO60931 367 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 TSPAN9O75954 239 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 AIFM1O95831 613 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 GUCA1CO95843 209 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 SLC16A8O95907 504 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 CHEK2O96017 543 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 LHBP01229 141 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 APOA4P06727 396 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 SMIM10L1P0DMW3 83 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 CHATP28329 748 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 ADRA1AP35348 466 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 FEN1P39748 380 aaKnown RBP4.1□□□□□ -1.75
SDCBP-205ENST00000447267 MAP2K6P52564 334 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 CLNS1AP54105 237 aaKnown RBP4.1□□□□□ -1.75
SDCBP-205ENST00000447267 FOXG1P55316 489 aaPredicted RBP4.1□□□□□ -1.75
SDCBP-205ENST00000447267 RPS13P62277 151 aaKnown RBP4.1□□□□□ -1.75
SDCBP-205ENST00000447267 SLC35A2P78381 396 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 BST1Q10588 318 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 ARHGAP19Q14CB8 494 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 MORF4L2Q15014 288 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 CEP78Q5JTW2 689 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 FRG2Q64ET8 278 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 SLC30A6Q6NXT4 461 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 RANBP10Q6VN20 620 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 Q6ZT83 130 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 RAPH1Q70E73 1250 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 SLC29A4Q7RTT9 530 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 OVCH2Q7RTZ1 564 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 ZNF551Q7Z340 670 aaPredicted RBP4.1□□□□□ -1.75
SDCBP-205ENST00000447267 LUZP1Q86V48 1076 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 P2RY8Q86VZ1 359 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 ZNF433Q8N7K0 673 aaPredicted RBP4.1□□□□□ -1.75
SDCBP-205ENST00000447267 WDR31Q8NA23 367 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 OR10D3Q8NH80 312 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 GSDMBQ8TAX9 411 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 ABHD3Q8WU67 409 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 HGDQ93099 445 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 SMARCE1Q969G3 411 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 DTNBP1Q96EV8 351 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 SMIM10Q96HG1 83 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 CITED2Q99967 270 aaPredicted RBP4.1□□□□□ -1.75
SDCBP-205ENST00000447267 CLK4Q9HAZ1 481 aaKnown RBP4.1□□□□□ -1.75
SDCBP-205ENST00000447267 NOX4Q9NPH5 578 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 SCRT2Q9NQ03 307 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 DNAH11Q96DT5 4516 aa4.1□□□□□ -1.75
SDCBP-205ENST00000447267 PKHD1P08F94 4074 aa4.09□□□□□ -1.75
SDCBP-205ENST00000447267 A0A0B4J203 849 aa4.09□□□□□ -1.75
SDCBP-205ENST00000447267 C2orf92A0A1B0GVN3 265 aa4.09□□□□□ -1.75
SDCBP-205ENST00000447267 CIB4A0PJX0 185 aa4.09□□□□□ -1.75
SDCBP-205ENST00000447267 OR2M5A3KFT3 312 aa4.09□□□□□ -1.75
SDCBP-205ENST00000447267 GMFGO60234 142 aa4.09□□□□□ -1.75
SDCBP-205ENST00000447267 EEDO75530 441 aaKnown RBP4.09□□□□□ -1.75
SDCBP-205ENST00000447267 RP2O75695 350 aa4.09□□□□□ -1.75
SDCBP-205ENST00000447267 SYNGR4O95473 234 aa4.09□□□□□ -1.75
SDCBP-205ENST00000447267 IL33O95760 270 aa4.09□□□□□ -1.75
SDCBP-205ENST00000447267 IGHV3-9P01782 118 aa4.09□□□□□ -1.75
SDCBP-205ENST00000447267 CLPSP04118 112 aa4.09□□□□□ -1.75
SDCBP-205ENST00000447267 IL6RP08887 468 aaPredicted RBP4.09□□□□□ -1.75
SDCBP-205ENST00000447267 CDH1P12830 882 aa4.09□□□□□ -1.75
SDCBP-205ENST00000447267 BTF3P20290 206 aaKnown RBP4.09□□□□□ -1.75
SDCBP-205ENST00000447267 SAT1P21673 171 aa4.09□□□□□ -1.75
SDCBP-205ENST00000447267 PSMA3P25788 255 aa4.09□□□□□ -1.75
SDCBP-205ENST00000447267 GABRA5P31644 462 aa4.09□□□□□ -1.75
SDCBP-205ENST00000447267 CD80P33681 288 aa4.09□□□□□ -1.75
SDCBP-205ENST00000447267 THBS4P35443 961 aa4.09□□□□□ -1.75
SDCBP-205ENST00000447267 PPP1R2P41236 205 aa4.09□□□□□ -1.75
SDCBP-205ENST00000447267 SLC1A3P43003 542 aa4.09□□□□□ -1.75
SDCBP-205ENST00000447267 MTIF2P46199 727 aaKnown RBP4.09□□□□□ -1.75
SDCBP-205ENST00000447267 VEGFCP49767 419 aa4.09□□□□□ -1.75
SDCBP-205ENST00000447267 KLK7P49862 253 aa4.09□□□□□ -1.75
SDCBP-205ENST00000447267 PSMD7P51665 324 aa4.09□□□□□ -1.75
SDCBP-205ENST00000447267 RAB38P57729 211 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms