RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 MFSD4BQ5TF39 518 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 NKAIN2Q5VXU1 208 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 C18orf63Q68DL7 685 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 FAM180BQ6P0A1 224 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 SLC48A1Q6P1K1 146 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 TMEM107Q6UX40 140 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 CEACAM20Q6UY09 585 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 TMEM64Q6YI46 380 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 DGLUCYQ7Z3D6 616 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZNF329Q86UD4 541 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 C17orf82Q86X59 251 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 CALHM3Q86XJ0 350 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 RNF130Q86XS8 419 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 TMEM126BQ8IUX1 230 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 EID3Q8N140 333 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 CLEC4FQ8N1N0 589 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 LRRC25Q8N386 305 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 AMER3Q8N944 861 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR4K14Q8NGD5 310 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR4C6Q8NH72 309 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 GOT1L1Q8NHS2 421 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 NFKBIDQ8NI38 313 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 TMEM163Q8TC26 289 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 LZICQ8WZA0 190 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 NAT6Q93015 286 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 TM4SF19Q96DZ7 209 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 CNRIP1Q96F85 164 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 DUS3LQ96G46 650 aaKnown RBP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 TPD52L3Q96J77 140 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 MAGED4Q96JG8 741 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZNF583Q96ND8 569 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 MS4A4EQ96PG1 132 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 CSF3RQ99062 836 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZNF184Q99676 751 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 PKP2Q99959 881 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 MAPKAP1Q9BPZ7 522 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 C9orf16Q9BUW7 83 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 GTPBP2Q9BX10 602 aaKnown RBP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 NPLQ9BXD5 320 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 NPFFR1Q9GZQ6 430 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 AICDAQ9GZX7 198 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 TWSG1Q9GZX9 223 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 RAB33BQ9H082 229 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 SEMA6AQ9H2E6 1030 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 GLIPR2Q9H4G4 154 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 MAGIXQ9H6Y5 334 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 GAREM1Q9H706 876 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 RPF2Q9H7B2 306 aaKnown RBP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 TRIM45Q9H8W5 580 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 GORASP2Q9H8Y8 452 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 LYRM4Q9HD34 91 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 C8orf4Q9NR00 106 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 STARD5Q9NSY2 213 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 ACSS1Q9NUB1 689 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 DDX18Q9NVP1 670 aaKnown RBP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 ARMC1Q9NVT9 282 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 THUMPD1Q9NXG2 353 aaKnown RBP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 HCN3Q9P1Z3 774 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 P2RX2Q9UBL9 471 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 RIMS3Q9UJD0 308 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 PILRAQ9UKJ1 303 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 PLCL2Q9UPR0 1127 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 EXO1Q9UQ84 846 aaKnown RBP3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 NAALAD2Q9Y3Q0 740 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 ATG4BQ9Y4P1 393 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 ASB4Q9Y574 426 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 KLK4Q9Y5K2 254 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 SCN3AQ9NY46 2000 aa3.49□□□□□ -1.85
HMGB3P20-201ENST00000417997 F5P12259 2224 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 MN1Q10571 1320 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 C5orf42Q9H799 3197 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 A0A0A6YYC8 382 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 IGHV4-28A0A0C4DH34 117 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 IGHV5-51A0A0C4DH38 117 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 HYKKA2RU49 373 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 FAM149AA5PLN7 773 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR6C68A6NDL8 312 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 MYO1GB0I1T2 1018 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 I3L1I5 382 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 SGK494L7N484 410 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 CLDN4O14493 209 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 EMC8O43402 210 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR2B3O76000 313 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 KCNK5O95279 499 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 NSA2O95478 260 aaKnown RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 CST1P01037 141 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 OPN1SWP03999 348 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 RPLP0P05388 317 aaKnown RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 FABP3P05413 133 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 FHP07954 510 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 RPSAP08865 295 aaKnown RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 CSF1P09603 554 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 SP9P0CG40 484 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 C8orf89P0DMQ9 161 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 NR2F1P10589 423 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 RNH1P13489 461 aaKnown RBP3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 CPMP14384 443 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 ATP6V1C1P21283 382 aa3.48□□□□□ -1.85
HMGB3P20-201ENST00000417997 KDELR2P33947 212 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms