RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 SLAMF8Q9P0V8 285 aa15.73■□□□□ 0.11
LSM5-204ENST00000409909 KLHL9Q9P2J3 617 aa15.73■□□□□ 0.11
LSM5-204ENST00000409909 FLNAP21333 2647 aaKnown RBP15.73■□□□□ 0.11
LSM5-204ENST00000409909 NF1P21359 2839 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 A0A096LPI6 279 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 TMED7-TICAM2A0A0A6YYA0 188 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 CDHR4A6H8M9 788 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 CFAP73A6NFT4 308 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 ZNF814B7Z6K7 855 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 CLIC1O00299 241 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 FAAHO00519 579 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 KLF4O43474 513 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 SASH3O75995 380 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 PPP3CBP16298 524 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 CD53P19397 219 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 CCNA2P20248 432 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 PSMB1P20618 241 aaKnown RBP15.72■□□□□ 0.11
LSM5-204ENST00000409909 CRISP3P54108 245 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 CSNK2A1P68400 391 aaPredicted RBP15.72■□□□□ 0.11
LSM5-204ENST00000409909 EPS8Q12929 822 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 GNA13Q14344 377 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 TSC22D1Q15714 1073 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 ZNF836Q6ZNA1 936 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 MTDHQ86UE4 582 aaKnown RBP15.72■□□□□ 0.11
LSM5-204ENST00000409909 MSRB3Q8IXL7 192 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 TMEM19Q96HH6 336 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 ALPK1Q96QP1 1244 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 ARGLU1Q9NWB6 273 aaPredicted RBP15.72■□□□□ 0.11
LSM5-204ENST00000409909 CALML5Q9NZT1 146 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 CCDC167Q9P0B6 97 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 OSGIN1Q9UJX0 560 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 GPR52Q9Y2T5 361 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 TMED7Q9Y3B3 224 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 CHST2Q9Y4C5 530 aa15.72■□□□□ 0.11
LSM5-204ENST00000409909 SPIN1Q9Y657 262 aaPredicted RBP15.72■□□□□ 0.11
LSM5-204ENST00000409909 ZNF724A8MTY0 619 aa15.71■□□□□ 0.11
LSM5-204ENST00000409909 PMS2P2O95744 297 aa15.71■□□□□ 0.11
LSM5-204ENST00000409909 GKN3PP0CG01 181 aa15.71■□□□□ 0.11
LSM5-204ENST00000409909 TACR3P29371 465 aa15.71■□□□□ 0.11
LSM5-204ENST00000409909 ACAA2P42765 397 aaKnown RBP15.71■□□□□ 0.11
LSM5-204ENST00000409909 SLC1A3P43003 542 aa15.71■□□□□ 0.11
LSM5-204ENST00000409909 HTR3AP46098 478 aa15.71■□□□□ 0.11
LSM5-204ENST00000409909 POLR2HP52434 150 aaKnown RBP15.71■□□□□ 0.11
LSM5-204ENST00000409909 DEFB113Q30KQ7 82 aa15.71■□□□□ 0.11
LSM5-204ENST00000409909 PAGE3Q5JUK9 113 aa15.71■□□□□ 0.11
LSM5-204ENST00000409909 LRIF1Q5T3J3 769 aa15.71■□□□□ 0.11
LSM5-204ENST00000409909 CLIP4Q8N3C7 705 aa15.71■□□□□ 0.11
LSM5-204ENST00000409909 MAL2Q969L2 176 aa15.71■□□□□ 0.11
LSM5-204ENST00000409909 S100PBPQ96BU1 408 aa15.71■□□□□ 0.11
LSM5-204ENST00000409909 SPDL1Q96EA4 605 aa15.71■□□□□ 0.11
LSM5-204ENST00000409909 THOC1Q96FV9 657 aaKnown RBP15.71■□□□□ 0.11
LSM5-204ENST00000409909 MAGEB18Q96M61 343 aa15.71■□□□□ 0.11
LSM5-204ENST00000409909 TACO1Q9BSH4 297 aaKnown RBP15.71■□□□□ 0.11
LSM5-204ENST00000409909 ADAM19Q9H013 955 aa15.71■□□□□ 0.11
LSM5-204ENST00000409909 FANCFQ9NPI8 374 aa15.71■□□□□ 0.11
LSM5-204ENST00000409909 THUMPD1Q9NXG2 353 aaKnown RBP15.71■□□□□ 0.11
LSM5-204ENST00000409909 ZNF443Q9Y2A4 671 aaPredicted RBP15.71■□□□□ 0.11
LSM5-204ENST00000409909 HDGFL3Q9Y3E1 203 aa15.71■□□□□ 0.11
LSM5-204ENST00000409909 ZFHX3Q15911 3703 aa15.7■□□□□ 0.1
LSM5-204ENST00000409909 A0A0G2JPF8 293 aa15.7■□□□□ 0.1
LSM5-204ENST00000409909 TMEM72A0PK05 275 aa15.7■□□□□ 0.1
LSM5-204ENST00000409909 HNRNPCL2B2RXH8 293 aa15.7■□□□□ 0.1
LSM5-204ENST00000409909 HNRNPCL3B7ZW38 293 aa15.7■□□□□ 0.1
LSM5-204ENST00000409909 NR5A2O00482 541 aa15.7■□□□□ 0.1
LSM5-204ENST00000409909 HNRNPCL1O60812 293 aaKnown RBP15.7■□□□□ 0.1
LSM5-204ENST00000409909 ADAP00813 363 aa15.7■□□□□ 0.1
LSM5-204ENST00000409909 HNRNPCL4P0DMR1 293 aa15.7■□□□□ 0.1
LSM5-204ENST00000409909 BMP2P12643 396 aa15.7■□□□□ 0.1
LSM5-204ENST00000409909 PRG2P13727 222 aa15.7■□□□□ 0.1
LSM5-204ENST00000409909 FKBP2P26885 142 aaKnown RBP15.7■□□□□ 0.1
LSM5-204ENST00000409909 OR3A2P47893 321 aa15.7■□□□□ 0.1
LSM5-204ENST00000409909 CLK1P49759 484 aaKnown RBP15.7■□□□□ 0.1
LSM5-204ENST00000409909 LIN52Q52LA3 116 aa15.7■□□□□ 0.1
LSM5-204ENST00000409909 AGKQ53H12 422 aa15.7■□□□□ 0.1
LSM5-204ENST00000409909 SFRP5Q5T4F7 317 aa15.7■□□□□ 0.1
LSM5-204ENST00000409909 ABLIM2Q6H8Q1 611 aa15.7■□□□□ 0.1
LSM5-204ENST00000409909 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.7■□□□□ 0.1
LSM5-204ENST00000409909 C10orf111Q8N326 155 aa15.7■□□□□ 0.1
LSM5-204ENST00000409909 HDHD5Q9BXW7 423 aa15.7■□□□□ 0.1
LSM5-204ENST00000409909 RSPO3Q9BXY4 272 aaPredicted RBP15.7■□□□□ 0.1
LSM5-204ENST00000409909 OR10A4Q9H209 315 aa15.7■□□□□ 0.1
LSM5-204ENST00000409909 A4GALTQ9NPC4 353 aa15.7■□□□□ 0.1
LSM5-204ENST00000409909 PRSS50Q9UI38 385 aa15.7■□□□□ 0.1
LSM5-204ENST00000409909 IGKV3D-15A0A087WSY6 115 aa15.69■□□□□ 0.1
LSM5-204ENST00000409909 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.69■□□□□ 0.1
LSM5-204ENST00000409909 ZC3H12DA2A288 527 aaKnown RBP15.69■□□□□ 0.1
LSM5-204ENST00000409909 ZNF716A6NP11 495 aa15.69■□□□□ 0.1
LSM5-204ENST00000409909 ZNF208O43345 1280 aa15.69■□□□□ 0.1
LSM5-204ENST00000409909 RAMP1O60894 148 aa15.69■□□□□ 0.1
LSM5-204ENST00000409909 THBS1P07996 1170 aa15.69■□□□□ 0.1
LSM5-204ENST00000409909 IMPDH2P12268 514 aa15.69■□□□□ 0.1
LSM5-204ENST00000409909 NTF4P34130 210 aa15.69■□□□□ 0.1
LSM5-204ENST00000409909 ATP4BP51164 291 aa15.69■□□□□ 0.1
LSM5-204ENST00000409909 PDK3Q15120 406 aa15.69■□□□□ 0.1
LSM5-204ENST00000409909 RNF220Q5VTB9 566 aa15.69■□□□□ 0.1
LSM5-204ENST00000409909 Q6ZT83 130 aa15.69■□□□□ 0.1
LSM5-204ENST00000409909 WFDC8Q8IUA0 241 aa15.69■□□□□ 0.1
LSM5-204ENST00000409909 TGIF2LYQ8IUE0 185 aa15.69■□□□□ 0.1
LSM5-204ENST00000409909 CCDC103Q8IW40 242 aa15.69■□□□□ 0.1
LSM5-204ENST00000409909 ZNF440Q8IYI8 595 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms